RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 KRT77Q7Z794 578 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 MYCBPAPQ8TBZ2 947 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 PBRM1Q86U86 1689 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 IQCA1LA6NCM1 817 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 FAM205CA6NFA0 338 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 LSM1O15116 133 aaKnown RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 SARSP49591 514 aaKnown RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 PFKFB3Q16875 520 aaPredicted RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 TCHHL1Q5QJ38 904 aaPredicted RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 C11orf88Q6PI97 169 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 POTEAQ6S8J7 498 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 OR6J1Q8NGC5 347 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 PTPRN2Q92932 1015 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 GRIP2Q9C0E4 1043 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 CHORDC1Q9UHD1 332 aaPredicted RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 DSEQ9UL01 958 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 UTYO14607 1347 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 GGPS1O95749 300 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 GSTM1P09488 218 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 PSMA4P25789 261 aaKnown RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 ZSWIM7Q19AV6 140 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 GJB7Q6PEY0 223 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 AGPAT1Q99943 283 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 TINF2Q9BSI4 451 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 SNX13Q9Y5W8 968 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 NDUFB5O43674 189 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 CLPTM1O96005 669 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 MZF1P28698 734 aaPredicted RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 KHDRBS2Q5VWX1 349 aaKnown RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 CENPPQ6IPU0 288 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 IZUMO2Q6UXV1 221 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 SCFD1Q8WVM8 642 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 PIGBQ92521 554 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 E2F7Q96AV8 911 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 FOPNLQ96NB1 174 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 ZNF335Q9H4Z2 1342 aaPredicted RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 APOA4P06727 396 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 KPNB1Q14974 876 aaKnown RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 PGS1Q32NB8 556 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 BBS7Q8IWZ6 715 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 ZNF512Q96ME7 567 aaPredicted RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 LY9Q9HBG7 655 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 E9PBE3 544 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 LDHAP00338 332 aaKnown RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 NUP62P37198 522 aaPredicted RBP8.22□□□□□ -1.09
CIITA-201ENST00000324288 SPP2Q13103 211 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 TTLL6Q8N841 843 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 SH3GLB2Q9NR46 395 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 FGFR3P22607 806 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 RAD23AP54725 363 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 SHC4Q6S5L8 630 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 RCOR2Q8IZ40 523 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 C2orf69Q8N8R5 385 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 STK39Q9UEW8 545 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 TBX22Q9Y458 520 aa8.22□□□□□ -1.09
CIITA-201ENST00000324288 UNC13AQ9UPW8 1703 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 CLVS1Q8IUQ0 354 aaPredicted RBP8.21□□□□□ -1.09
CIITA-201ENST00000324288 ARID3BQ8IVW6 561 aaPredicted RBP8.21□□□□□ -1.09
CIITA-201ENST00000324288 RFFLQ8WZ73 363 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 JPH1Q9HDC5 661 aaPredicted RBP8.21□□□□□ -1.09
CIITA-201ENST00000324288 PARVAQ9NVD7 372 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 CACNA1BQ00975 2339 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 QARSP47897 775 aaKnown RBP8.21□□□□□ -1.09
CIITA-201ENST00000324288 NCALDP61601 193 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 ETAA1Q9NY74 926 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 RPAP1Q9BWH6 1393 aaPredicted RBP8.21□□□□□ -1.09
CIITA-201ENST00000324288 PSTPIP1O43586 416 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 TOMM70O94826 608 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 GUCY1A2P33402 732 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 SAPCD2Q86UD0 394 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 METTL16Q86W50 562 aaKnown RBP8.21□□□□□ -1.09
CIITA-201ENST00000324288 GPD1LQ8N335 351 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 STRBPQ96SI9 672 aaKnown RBP8.21□□□□□ -1.09
CIITA-201ENST00000324288 SERHL2Q9H4I8 314 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 SERHLQ9NQF3 203 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 MPP6Q9NZW5 540 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 C1orf232A0A0U1RR37 186 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 SPTLC1O15269 473 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 PRDX5P30044 214 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 IL6STP40189 918 aaPredicted RBP8.21□□□□□ -1.09
CIITA-201ENST00000324288 HSD17B4P51659 736 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 MTMR2Q13614 643 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 PI4K2AQ9BTU6 479 aa8.21□□□□□ -1.09
CIITA-201ENST00000324288 ZNF682O95780 498 aa8.21□□□□□ -1.1
CIITA-201ENST00000324288 ARF5P84085 180 aa8.21□□□□□ -1.1
CIITA-201ENST00000324288 GRAPQ13588 217 aa8.21□□□□□ -1.1
CIITA-201ENST00000324288 TMEM132DQ14C87 1099 aa8.21□□□□□ -1.1
CIITA-201ENST00000324288 CYP51A1Q16850 503 aa8.21□□□□□ -1.1
CIITA-201ENST00000324288 SHROOM1Q2M3G4 852 aaPredicted RBP8.21□□□□□ -1.1
CIITA-201ENST00000324288 QRICH1Q2TAL8 776 aa8.21□□□□□ -1.1
CIITA-201ENST00000324288 ZRANB3Q5FWF4 1079 aa8.21□□□□□ -1.1
CIITA-201ENST00000324288 CLEC10AQ8IUN9 316 aa8.21□□□□□ -1.1
CIITA-201ENST00000324288 GRAPLQ8TC17 118 aaPredicted RBP8.21□□□□□ -1.1
CIITA-201ENST00000324288 PAPOLBQ9NRJ5 636 aaKnown RBP8.21□□□□□ -1.1
CIITA-201ENST00000324288 ZNF624Q9P2J8 865 aaPredicted RBP8.21□□□□□ -1.1
CIITA-201ENST00000324288 F8VZ95 297 aa8.21□□□□□ -1.1
CIITA-201ENST00000324288 C21orf59P57076 290 aa8.21□□□□□ -1.1
CIITA-201ENST00000324288 RPS7P62081 194 aaKnown RBP8.21□□□□□ -1.1
CIITA-201ENST00000324288 PUDPQ08623 228 aa8.21□□□□□ -1.1
CIITA-201ENST00000324288 Q4G0T1 1027 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms