RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 SHCBP1LQ9BZQ2 653 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 PDGFDQ9GZP0 370 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 RHBDL2Q9NX52 303 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 ANGPTL2Q9UKU9 493 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 RPL26L1Q9UNX3 145 aaKnown RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 LAMB2P55268 1798 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 UMODL1Q5DID0 1318 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 SMCHD1A6NHR9 2005 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 TLR3O15455 904 aaKnown RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 DSG3P32926 999 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 CIITAP33076 1130 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 RPL7AP62424 266 aaKnown RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 CDC16Q13042 620 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 DOK7Q18PE1 504 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 LIN52Q52LA3 116 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 ZC3H12AQ5D1E8 599 aaKnown RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 FNBP1LQ5T0N5 605 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 TXNRD3NBQ6F5E7 133 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 ZNF276Q8N554 614 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 CERS5Q8N5B7 392 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 CCDC110Q8TBZ0 833 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 USP6NLQ92738 828 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 MKL1Q969V6 931 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 SKA1Q96BD8 255 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 CCDC124Q96CT7 223 aaKnown RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 RAB20Q9NX57 234 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 CLIC5Q9NZA1 410 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 RABGEF1Q9UJ41 708 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 ARHGAP42A6NI28 874 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 HNRNPCL1O60812 293 aaKnown RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 CIB2O75838 187 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 PGM3O95394 542 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 MT-ND3P03897 115 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 DLDP09622 509 aaKnown RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 LPCAT4Q643R3 524 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 CDC42EP5Q6NZY7 148 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 SV2AQ7L0J3 742 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 TDRPQ86YL5 185 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 ARID3BQ8IVW6 561 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 SCUBE1Q8IWY4 988 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 PALM2Q8IXS6 379 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 DNAJC5GQ8N7S2 189 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 FBXO36Q8NEA4 188 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 FBXL13Q8NEE6 735 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 FAM163AQ96GL9 167 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 VCX3BQ9H321 246 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 TMEM206Q9H813 350 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 VCX3AQ9NNX9 186 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 CCNL1Q9UK58 526 aaPredicted RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 CHMP2BQ9UQN3 213 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 STK24Q9Y6E0 443 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 KAT6AQ92794 2004 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 UBE4BO95155 1302 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 DENND3A2RUS2 1198 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 CCDC160A6NGH7 325 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 HARSP12081 509 aaKnown RBP10.13□□□□□ -0.79
PTPRA-202ENST00000318266 SOX10P56693 466 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 RASSF3Q86WH2 238 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 RELL1Q8IUW5 271 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 GSTCDQ8NEC7 633 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 ARHGEF1Q92888 912 aaKnown RBP10.13□□□□□ -0.79
PTPRA-202ENST00000318266 RILPQ96NA2 401 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 FAM192AQ9GZU8 254 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 TMX4Q9H1E5 349 aaPredicted RBP10.13□□□□□ -0.79
PTPRA-202ENST00000318266 RANBP17Q9H2T7 1088 aaKnown RBP10.13□□□□□ -0.79
PTPRA-202ENST00000318266 ARHGEF4Q9NR80 690 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 IPO5O00410 1097 aaKnown RBP10.13□□□□□ -0.79
PTPRA-202ENST00000318266 ALOX15BO15296 676 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 HNRNPRO43390 633 aaKnown RBP10.13□□□□□ -0.79
PTPRA-202ENST00000318266 SLC34A2O95436 690 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 UNGP13051 313 aaPredicted RBP10.13□□□□□ -0.79
PTPRA-202ENST00000318266 IL1R1P14778 569 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 EPHB1P54762 984 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 ZYXQ15942 572 aaKnown RBP10.13□□□□□ -0.79
PTPRA-202ENST00000318266 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.13□□□□□ -0.79
PTPRA-202ENST00000318266 FAM102BQ5T8I3 360 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 RNASEH2BQ5TBB1 312 aaKnown RBP10.13□□□□□ -0.79
PTPRA-202ENST00000318266 C6orf163Q5TEZ5 329 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 TRIM74Q86UV6 250 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 TRIM73Q86UV7 250 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 SATL1Q86VE3 508 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 SIAH1Q8IUQ4 282 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 ULK2Q8IYT8 1036 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 ARHGAP24Q8N264 748 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 EFCAB3Q8N7B9 438 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 MTBPQ96DY7 904 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 SERAC1Q96JX3 654 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 CENPKQ9BS16 269 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 GALNT8Q9NY28 637 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 SLC7A8Q9UHI5 535 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 MTO1Q9Y2Z2 717 aaKnown RBP10.13□□□□□ -0.79
PTPRA-202ENST00000318266 IVNS1ABPQ9Y6Y0 642 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 MYPNQ86TC9 1320 aa10.13□□□□□ -0.79
PTPRA-202ENST00000318266 TCRBV7S3A2A0A539 114 aa10.12□□□□□ -0.79
PTPRA-202ENST00000318266 DDTLA6NHG4 134 aaPredicted RBP10.12□□□□□ -0.79
PTPRA-202ENST00000318266 P4HA2O15460 535 aa10.12□□□□□ -0.79
PTPRA-202ENST00000318266 FAM155BO75949 473 aa10.12□□□□□ -0.79
PTPRA-202ENST00000318266 SORBS2O94875 1100 aaKnown RBP10.12□□□□□ -0.79
PTPRA-202ENST00000318266 GDF10P55107 478 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms