RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SSU72Q9NP77 194 aaKnown RBP14.14□□□□□ -0.15
SKA3-202ENST00000314759 ANKFY1Q9P2R3 1169 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 TCEAL9Q9UHQ7 104 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 GCLCP48506 637 aaPredicted RBP14.14□□□□□ -0.15
SKA3-202ENST00000314759 PLCB3Q01970 1234 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 ENPEPQ07075 957 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 RCN2Q14257 317 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 SLC27A3Q5K4L6 730 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 FAM43BQ6ZT52 329 aaPredicted RBP14.14□□□□□ -0.15
SKA3-202ENST00000314759 ZNF398Q8TD17 642 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 TCP10LQ8TDR4 215 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 FNBP1Q96RU3 617 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 PPP1R12CQ9BZL4 782 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 PPCSQ9HAB8 311 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 TMEM191CA6NGB0 347 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 SGK1O00141 431 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 ATP2A1O14983 1001 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 ZBED4O75132 1171 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 KRT36O76013 467 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 TMEM191BP0C7N4 346 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 GLRA2P23416 452 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 ACOT2P49753 483 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 PSMD6Q15008 389 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 PGM5Q15124 567 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 HIF1AQ16665 826 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 MSS51Q4VC12 460 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 SNX30Q5VWJ9 437 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 IFT43Q96FT9 208 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 C17orf75Q9HAS0 396 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 SLC17A7Q9P2U7 560 aa14.14□□□□□ -0.15
SKA3-202ENST00000314759 ZNF646O15015 1829 aaPredicted RBP14.13□□□□□ -0.15
SKA3-202ENST00000314759 hCG_1818297A0A087WSY0 165 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 GOLGA8RI6L899 631 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 EXTL3O43909 919 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 ZNF862O60290 1169 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 LGR5O75473 907 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 ITGAVP06756 1048 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 TROVE2P10155 538 aaKnown RBP eCLIP14.13□□□□□ -0.15
SKA3-202ENST00000314759 SFNP31947 248 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 NLRP11P59045 1033 aaKnown RBP14.13□□□□□ -0.15
SKA3-202ENST00000314759 RCN1Q15293 331 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 FNBP1LQ5T0N5 605 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 MTHFD1LQ6UB35 978 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 MCF2L2Q86YR7 1114 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 MZB1Q8WU39 189 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 SCG3Q8WXD2 468 aaKnown RBP14.13□□□□□ -0.15
SKA3-202ENST00000314759 PTPRN2Q92932 1015 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 NKD2Q969F2 451 aaPredicted RBP14.13□□□□□ -0.15
SKA3-202ENST00000314759 KLF6Q99612 283 aaPredicted RBP14.13□□□□□ -0.15
SKA3-202ENST00000314759 PCDH9Q9HC56 1237 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 ARL8BQ9NVJ2 186 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 SAE1Q9UBE0 346 aaPredicted RBP14.13□□□□□ -0.15
SKA3-202ENST00000314759 FARP1Q9Y4F1 1045 aaPredicted RBP14.13□□□□□ -0.15
SKA3-202ENST00000314759 A0A0G2JND7 137 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 CFAP69A5D8W1 941 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 MMP8P22894 467 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 PSMC4P43686 418 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 RPS6P62753 249 aaKnown RBP14.13□□□□□ -0.15
SKA3-202ENST00000314759 KRT76Q01546 638 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 OGDHQ02218 1023 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 MCL1Q07820 350 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 NBPF20Q3BBV1 942 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 ANKRD22Q5VYY1 191 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 ARMC3Q5W041 872 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 ADGRD1Q6QNK2 874 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 C3orf62Q6ZUJ4 267 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 DTX3LQ8TDB6 740 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 PAFAH2Q99487 392 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 WDR83Q9BRX9 315 aaKnown RBP14.13□□□□□ -0.15
SKA3-202ENST00000314759 C10orf88Q9H8K7 445 aa14.13□□□□□ -0.15
SKA3-202ENST00000314759 ALG13Q9NP73 1137 aaKnown RBP14.13□□□□□ -0.15
SKA3-202ENST00000314759 HNRNPCL1O60812 293 aaKnown RBP14.12□□□□□ -0.15
SKA3-202ENST00000314759 CCDC22O60826 627 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 LMNAP02545 664 aaKnown RBP14.12□□□□□ -0.15
SKA3-202ENST00000314759 GHRHRQ02643 423 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 MTM1Q13496 603 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 SEPT7Q16181 437 aaKnown RBP14.12□□□□□ -0.15
SKA3-202ENST00000314759 CCDC6Q16204 474 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 ZC3H12AQ5D1E8 599 aaKnown RBP14.12□□□□□ -0.15
SKA3-202ENST00000314759 ACSBG2Q5FVE4 666 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 TFDP3Q5H9I0 405 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 SCARA3Q6AZY7 606 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 BANPQ8N9N5 519 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 PYROXD1Q8WU10 500 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 PTCD3Q96EY7 689 aaKnown RBP14.12□□□□□ -0.15
SKA3-202ENST00000314759 MCEEQ96PE7 176 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 BTBD10Q9BSF8 475 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 DHRS4Q9BTZ2 278 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 MANSC1Q9H8J5 431 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 RAVER2Q9HCJ3 691 aaKnown RBP14.12□□□□□ -0.15
SKA3-202ENST00000314759 XPNPEP1Q9NQW7 623 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 TMOD2Q9NZR1 351 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 HEY2Q9UBP5 337 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 COL11A2P13942 1736 aaPredicted RBP14.12□□□□□ -0.15
SKA3-202ENST00000314759 TESPA1A2RU30 521 aaPredicted RBP14.12□□□□□ -0.15
SKA3-202ENST00000314759 VHLP40337 213 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 CDKN2BP42772 138 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 KPNB1Q14974 876 aaKnown RBP14.12□□□□□ -0.15
SKA3-202ENST00000314759 SLC5A9Q2M3M2 681 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 LRRC38Q5VT99 294 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms