RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 TMEM134Q9H6X4 195 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 SIX2Q9NPC8 291 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 MYPNQ86TC9 1320 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 SOWAHBA6NEL2 793 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 APOL1O14791 398 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 LGALS2P05162 132 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 GRIK4Q16099 956 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 ZACNQ401N2 412 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 FOXR1Q6PIV2 292 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 C12orf56Q8IXR9 622 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 ATXN7L3BQ96GX2 97 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 MYH10P35580 1976 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 CNTNAP1P78357 1384 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 ATP8B3O60423 1300 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 C17orf102A2RUQ5 167 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 CES2O00748 559 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 DHX15O43143 795 aaKnown RBP6.49□□□□□ -1.37
PRKDC-201ENST00000314191 LPXNO60711 386 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 TSPY1Q01534 308 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 C1QBPQ07021 282 aaKnown RBP6.49□□□□□ -1.37
PRKDC-201ENST00000314191 RAPGEF5Q92565 580 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.49□□□□□ -1.377e-12■■□□□ 11.6
PRKDC-201ENST00000314191 BFARQ9NZS9 450 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 ARHGEF37A1IGU5 675 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 M0QYT0 321 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 NOVP48745 357 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 RXFP2Q8WXD0 754 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 MAML1Q92585 1016 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 MAPK13O15264 365 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 STRNO43815 780 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 HMBSP08397 361 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 HIRAP54198 1017 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 LRRC34Q8IZ02 419 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 FRMD3A2A2Y4 597 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 KITP10721 976 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 ACAT1P24752 427 aaKnown RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 BTBD8Q5XKL5 378 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 NOTUMQ6P988 496 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.48□□□□□ -1.378e-6■■□□□ 11.7
PRKDC-201ENST00000314191 HELQQ8TDG4 1101 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 FAM172AQ8WUF8 416 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 HES6Q96HZ4 224 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 AKAP12Q02952 1782 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 ARFIP2P53365 341 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 ZNF280AP59817 542 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 PRUNE1Q86TP1 453 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 TRIM42Q8IWZ5 723 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 DCLK2Q8N568 766 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 SLC12A6Q9UHW9 1150 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 GPC4O75487 556 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 NCF2P19878 526 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 DRP2Q13474 957 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 PPIL6Q8IXY8 311 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 GNL1P36915 607 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 ZNF200P98182 395 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 NFIL3Q16649 462 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 BOLA3Q53S33 107 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 TDRD10Q5VZ19 366 aaKnown RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 TMC3Q7Z5M5 1100 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 PRELID2Q8N945 189 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 FBXO36Q8NEA4 188 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 ACTL9Q8TC94 416 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 SEC16BQ96JE7 1060 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 ROPN1BQ9BZX4 212 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 ROPN1Q9HAT0 212 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 CCDC195A0A1B0GUA6 201 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 PSTPIP1O43586 416 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 SYF2O95926 243 aaKnown RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 EFHC1Q5JVL4 640 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 SLC27A1Q6PCB7 646 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 C3orf62Q6ZUJ4 267 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 RYBPQ8N488 228 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 SLC7A14Q8TBB6 771 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 RAB3IPQ96QF0 476 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 LCA5LO95447 670 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 HSPA4LO95757 839 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 LSM8O95777 96 aaKnown RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 CTCFP49711 727 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 SESN3P58005 492 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 FARP2O94887 1054 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 RPSAP08865 295 aaKnown RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 OR1G1P47890 313 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 IFI35P80217 286 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 ASTE1Q2TB18 679 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 CCT6BQ92526 530 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 ALG3Q92685 438 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 PRG3Q9Y2Y8 225 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 IRS2Q9Y4H2 1338 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 RGPD1P0DJD0 1748 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 DFFAO00273 331 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 DDX3YO15523 660 aaKnown RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 BNIP3LO60238 219 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 BAG2O95816 211 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 YY1P25490 414 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 ATICP31939 592 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 NUMBP49757 651 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 CLNS1AP54105 237 aaKnown RBP6.48□□□□□ -1.37
PRKDC-201ENST00000314191 BEX3Q00994 111 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 SNCBQ16143 134 aa6.48□□□□□ -1.37
PRKDC-201ENST00000314191 HASPINQ8TF76 798 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms