RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 TAF2Q6P1X5 1199 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 CYB5R4Q7L1T6 521 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 LZTR1Q8N653 840 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 PRMT1Q99873 361 aaKnown RBP9.19□□□□□ -0.94
COL6A5-202ENST00000312481 C1orf50Q9BV19 199 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 AP1M1Q9BXS5 423 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 MYO16Q9Y6X6 1858 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 ACVR2BQ13705 512 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 FAM193BQ96PV7 902 aaPredicted RBP9.19□□□□□ -0.94
COL6A5-202ENST00000312481 ZNF556Q9HAH1 456 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 CORO2BQ9UQ03 480 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 SNX24Q9Y343 169 aa9.19□□□□□ -0.94
COL6A5-202ENST00000312481 SAGE2PA6NJ88 616 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 F8VZ95 297 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 ZNF197O14709 1029 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 RAD23AP54725 363 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 SCYL2Q6P3W7 929 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 AAGABQ6PD74 315 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 PSTKQ8IV42 348 aaKnown RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 PRPF18Q99633 342 aaKnown RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 TRMOQ9BU70 441 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 ZNF302Q9NR11 478 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 HSPBP1Q9NZL4 362 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 GRIN2DO15399 1336 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 FRMPD2Q68DX3 1309 aaPredicted RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 TBKBP1A7MCY6 615 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 RALBP11234 206 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 ROR2Q01974 943 aaKnown RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 S100ZQ8WXG8 99 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 ZNF341Q9BYN7 854 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 SMARCAD1Q9H4L7 1026 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 HDAC6Q9UBN7 1215 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 TAGLN3Q9UI15 199 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 SLIT2O94813 1529 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 SDR42E2A6NKP2 422 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 USP17L5A8MUK1 530 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 DIAPH2O60879 1101 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 KIF22Q14807 665 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 PSMD6Q15008 389 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 NUDT18Q6ZVK8 323 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 SLC26A11Q86WA9 606 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 KATNAL2Q8IYT4 538 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 SVOPQ8N4V2 548 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 ZCCHC9Q8N567 271 aaKnown RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 FEZF2Q8TBJ5 459 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 HELQQ8TDG4 1101 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 EDC3Q96F86 508 aaKnown RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 FAM161BQ96MY7 647 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 ZIM3Q96PE6 472 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 RAD21L1Q9H4I0 556 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 RIOX1Q9H6W3 641 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 AMACRQ9UHK6 382 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 HPS5Q9UPZ3 1129 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 C15orf41Q9Y2V0 281 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 ITGA1P56199 1179 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 RABGAP1LQ5R372 815 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 DDHD1Q8NEL9 900 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 ATP6V1E2Q96A05 226 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 DDX47Q9H0S4 455 aaKnown RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 SLC4A7Q9Y6M7 1214 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 F8W031 263 aaPredicted RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 SNAP91O60641 907 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 PLA2G6O60733 806 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 RFX5P48382 616 aaPredicted RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 EIF3EP60228 445 aaKnown RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 NET1Q7Z628 596 aaPredicted RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 PAPOLBQ9NRJ5 636 aaKnown RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 TRHDEQ9UKU6 1024 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 ZMYND8Q9ULU4 1186 aaPredicted RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 MFHAS1Q9Y4C4 1052 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 ALG6Q9Y672 507 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 PDHBP11177 359 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 PLA2G4AP47712 749 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 FXR1P51114 621 aaKnown RBP eCLIP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 TOP3AQ13472 1001 aaPredicted RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 NCAPHQ15003 741 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 PREPLQ4J6C6 727 aaPredicted RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 SAMD4BQ5PRF9 694 aaKnown RBP9.18□□□□□ -0.94
COL6A5-202ENST00000312481 SCUBE1Q8IWY4 988 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 SPATA18Q8TC71 538 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 SFI1A8K8P3 1242 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 TCEA3O75764 348 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 PLEKHA8P1O95397 391 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 CRABP2P29373 138 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 PTP4A2Q12974 167 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 KIF19Q2TAC6 998 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 PCDHGB4Q9UN71 923 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 LRP6O75581 1613 aa9.18□□□□□ -0.94
COL6A5-202ENST00000312481 DENND3A2RUS2 1198 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 KPNA4O00629 521 aaPredicted RBP9.17□□□□□ -0.94
COL6A5-202ENST00000312481 GRIK1P39086 918 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 CYP4A11Q02928 519 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 PRKAA1Q13131 559 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 TTLL9Q3SXZ7 439 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 SLC44A4Q53GD3 710 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 DNAJB7Q7Z6W7 309 aaPredicted RBP9.17□□□□□ -0.94
COL6A5-202ENST00000312481 PIGBQ92521 554 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 NT5C1AQ9BXI3 368 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 DLEC1Q9Y238 1755 aa9.17□□□□□ -0.94
COL6A5-202ENST00000312481 A0A087WXM4 84 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms