RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 MAGEA11P43364 429 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 ITIH3Q06033 890 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 ADCY1Q08828 1119 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 NR1I3Q14994 352 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 SYCP1Q15431 976 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 STILQ15468 1287 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 VSTM1Q6UX27 236 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 NEK11Q8NG66 645 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 HLA-CQ95604 372 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 TMEM176AQ96HP8 235 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 PCMTD1Q96MG8 357 aaPredicted RBP19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 PKMYT1Q99640 499 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 LSM14BQ9BX40 385 aaKnown RBP19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 ELOVL4Q9GZR5 314 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 CNTN6Q9UQ52 1028 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 SIK3Q9Y2K2 1263 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 XYLBO75191 536 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 ZMYND10O75800 440 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 C8AP07357 584 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 UCHL3P15374 230 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 EPCAMP16422 314 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 KCNMA1Q12791 1236 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 PUS10Q3MIT2 529 aaKnown RBP19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 ANKRD54Q6NXT1 300 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 LLGL2Q6P1M3 1020 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 RNF19BQ6ZMZ0 732 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 RRAGAQ7L523 313 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 ARHGEF19Q8IW93 802 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 ELMOD1Q8N336 334 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 UBR7Q8N806 425 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 ARID3AQ99856 593 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 CYP4F11Q9HBI6 524 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 SIX2Q9NPC8 291 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 GTF3C4Q9UKN8 822 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 PCDHB4Q9Y5E5 795 aa19.05■□□□□ 0.64
SSSCA1-201ENST00000309328 TSC2P49815 1807 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 GLP2RO95838 553 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 LRG1P02750 347 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 OR4Q2P0C623 313 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 ACO1P21399 889 aaKnown RBP19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 ALDH1A3P47895 512 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 BPIFB4P59827 614 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 PSMC1P62191 440 aaKnown RBP19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 RPL10AP62906 217 aaKnown RBP19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 CCDC85BQ15834 202 aaPredicted RBP19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 AAK1Q2M2I8 961 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 PPM1LQ5SGD2 360 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 CES5AQ6NT32 575 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 TMEM270Q6UE05 265 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 SHC3Q92529 594 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 PCED1BQ96HM7 432 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 KREMEN1Q96MU8 473 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 TMEM209Q96SK2 561 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 NUP58Q9BVL2 599 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 STK33Q9BYT3 514 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 UBE2ZQ9H832 354 aaPredicted RBP19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 CRTAC1Q9NQ79 661 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 DNAJC12Q9UKB3 198 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 FAM50BQ9Y247 325 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 ASB3Q9Y575 518 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 INSL5Q9Y5Q6 135 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 MYO7AQ13402 2215 aa19.04■□□□□ 0.64
SSSCA1-201ENST00000309328 MYBPHLA2RUH7 354 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 TRIM66O15016 1216 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 GTF2F1P35269 517 aaKnown RBP eCLIP19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 SLC8A3P57103 927 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 VEPH1Q14D04 833 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 MDH1BQ5I0G3 518 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 SARM1Q6SZW1 724 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 ACOT1Q86TX2 421 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 LRRTM3Q86VH5 581 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 VN1R2Q8NFZ6 395 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 SLC7A14Q8TBB6 771 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 WHAMMQ8TF30 809 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 MYLPFQ96A32 169 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 ELMO3Q96BJ8 720 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 SMARCD1Q96GM5 515 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 HEXIM2Q96MH2 286 aaKnown RBP19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 HNRNPABQ99729 332 aaKnown RBP19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 EDEM3Q9BZQ6 932 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 DPEP3Q9H4B8 488 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 FAM207AQ9NSI2 230 aaPredicted RBP19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 ABI2Q9NYB9 513 aaPredicted RBP19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 EHD2Q9NZN4 543 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 MYO6Q9UM54 1294 aa19.03■□□□□ 0.64
SSSCA1-201ENST00000309328 TBX10O75333 385 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 HAPLN1P10915 354 aaPredicted RBP19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 VDRP11473 427 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 KRT5P13647 590 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 ZNF132P52740 706 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 RAD23BP54727 409 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 EPHB3P54753 998 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 CYP27A1Q02318 531 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 DUSP4Q13115 394 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 MEA1Q16626 185 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 MGAT5BQ3V5L5 792 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 SGO2Q562F6 1265 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 FIGNQ5HY92 759 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 ARHGAP17Q68EM7 881 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms