RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 PTK7Q13308 1070 aa11.71□□□□□ -0.54
PTPN7-201ENST00000309017 NBPF20Q3BBV1 942 aa11.71□□□□□ -0.54
PTPN7-201ENST00000309017 IZUMO2Q6UXV1 221 aa11.71□□□□□ -0.54
PTPN7-201ENST00000309017 SPOCD1Q6ZMY3 1216 aa11.71□□□□□ -0.54
PTPN7-201ENST00000309017 ZNF677Q86XU0 584 aa11.71□□□□□ -0.54
PTPN7-201ENST00000309017 RELL1Q8IUW5 271 aa11.71□□□□□ -0.54
PTPN7-201ENST00000309017 ZDHHC15Q96MV8 337 aa11.71□□□□□ -0.54
PTPN7-201ENST00000309017 SLITRK1Q96PX8 696 aa11.71□□□□□ -0.54
PTPN7-201ENST00000309017 TAS2R1Q9NYW7 299 aa11.71□□□□□ -0.54
PTPN7-201ENST00000309017 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.71□□□□□ -0.54
PTPN7-201ENST00000309017 UMODL1Q5DID0 1318 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 F8VP50 259 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 TXNDC9O14530 226 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 TRAFD1O14545 582 aaPredicted RBP11.7□□□□□ -0.54
PTPN7-201ENST00000309017 SLC25A41Q8N5S1 370 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 ZNF398Q8TD17 642 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 PTPRN2Q92932 1015 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 AGBL1Q96MI9 1066 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 PPCSQ9HAB8 311 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 IRAK4Q9NWZ3 460 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 CDK5RAP2Q96SN8 1893 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 FAM237BA0A1B0GVD1 139 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 COPEO14579 308 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 LAMB3Q13751 1172 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 MON1BQ7L1V2 547 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 IL31RAQ8NI17 732 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 TMC2Q8TDI7 906 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 ALKBH8Q96BT7 664 aaKnown RBP11.7□□□□□ -0.54
PTPN7-201ENST00000309017 NDC80O14777 642 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 TM9SF1O15321 606 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 UGCGQ16739 394 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 TATDN1Q6P1N9 297 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 ALYREFQ86V81 257 aaKnown RBP11.7□□□□□ -0.54
PTPN7-201ENST00000309017 ARID3BQ8IVW6 561 aaPredicted RBP11.7□□□□□ -0.54
PTPN7-201ENST00000309017 TMEM161BQ8NDZ6 487 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 SH3TC2Q8TF17 1288 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 NRG4Q8WWG1 115 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 CFAP36Q96G28 342 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 OXNAD1Q96HP4 312 aaPredicted RBP11.7□□□□□ -0.54
PTPN7-201ENST00000309017 SLC13A1Q9BZW2 595 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 WDR35Q9P2L0 1181 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 COQ4Q9Y3A0 265 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 SMCHD1A6NHR9 2005 aa11.7□□□□□ -0.54
PTPN7-201ENST00000309017 TNRC6CQ9HCJ0 1690 aaKnown RBP11.7□□□□□ -0.54
PTPN7-201ENST00000309017 CLRN2A0PK11 232 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 SPECC1L-ADORA2AF8WAN1 911 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 PYGBP11216 843 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 GYS1P13807 737 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 AMPD1P23109 780 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 ALDH18A1P54886 795 aaKnown RBP11.69□□□□□ -0.54
PTPN7-201ENST00000309017 SNRPFP62306 86 aaKnown RBP11.69□□□□□ -0.54
PTPN7-201ENST00000309017 OCRLQ01968 901 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 KCNT1Q5JUK3 1230 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 RNASEH2BQ5TBB1 312 aaKnown RBP11.69□□□□□ -0.54
PTPN7-201ENST00000309017 TRIM72Q6ZMU5 477 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 PCGF5Q86SE9 256 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 PPIL6Q8IXY8 311 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 NMUR2Q9GZQ4 415 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 VPS11Q9H270 941 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 PCDH9Q9HC56 1237 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 STX18Q9P2W9 335 aaKnown RBP11.69□□□□□ -0.54
PTPN7-201ENST00000309017 XPO7Q9UIA9 1087 aaKnown RBP11.69□□□□□ -0.54
PTPN7-201ENST00000309017 GCLCP48506 637 aaPredicted RBP11.69□□□□□ -0.54
PTPN7-201ENST00000309017 SLC18A1P54219 525 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 GPX6P59796 221 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 PSMC5P62195 406 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 AP2B1P63010 937 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 NOMO3P69849 1222 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 IRX4P78413 519 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 OTUD4Q01804 1114 aaKnown RBP11.69□□□□□ -0.54
PTPN7-201ENST00000309017 AP1B1Q10567 949 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 PTP4A2Q12974 167 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 TFDP3Q5H9I0 405 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 EFHC2Q5JST6 749 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 ANKRD22Q5VYY1 191 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 ABRAQ8N0Z2 381 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 PPM1NQ8N819 430 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 HIPK4Q8NE63 616 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 ACTL9Q8TC94 416 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 ACAP3Q96P50 834 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 SMYD3Q9H7B4 428 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 PDP2Q9P2J9 529 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 RABGEF1Q9UJ41 708 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 KLHL33A6NCF5 533 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 CST8O60676 142 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 RPS6KA3P51812 740 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 RFX6Q8HWS3 928 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 MAP4K3Q8IVH8 894 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 CLPTM1LQ96KA5 538 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 ZNF212Q9UDV6 495 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 NUMBLQ9Y6R0 609 aa11.69□□□□□ -0.54
PTPN7-201ENST00000309017 KAT6AQ92794 2004 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 RANBP1P43487 201 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 TKFCQ3LXA3 575 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 FNBP1LQ5T0N5 605 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 SCUBE1Q8IWY4 988 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 MTBPQ96DY7 904 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 CCDC160A6NGH7 325 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 NFIBO00712 420 aa11.68□□□□□ -0.54
PTPN7-201ENST00000309017 ECE2O60344 883 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms