RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 NFE2Q16621 373 aaPredicted RBP23.59■■□□□ 1.37
SNUPN-201ENST00000308588 GBP6Q6ZN66 633 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 UNC93AQ86WB7 457 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 WHAMMQ8TF30 809 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 ATXN2LQ8WWM7 1075 aaKnown RBP23.59■■□□□ 1.37
SNUPN-201ENST00000308588 ZNF707Q96C28 371 aaPredicted RBP23.59■■□□□ 1.37
SNUPN-201ENST00000308588 LPIN3Q9BQK8 851 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 VPS16Q9H269 839 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 SLC27A5Q9Y2P5 690 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 BECN2A8MW95 431 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 MBTPS2O43462 519 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 HNRNPA1P09651 372 aaKnown RBP eCLIP23.59■■□□□ 1.37
SNUPN-201ENST00000308588 CD58P19256 250 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 SLC9A1P19634 815 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 CDK11BP21127 795 aaKnown RBP23.59■■□□□ 1.37
SNUPN-201ENST00000308588 HOXA9P31269 272 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 SMAD4Q13485 552 aaKnown RBP23.59■■□□□ 1.37
SNUPN-201ENST00000308588 EXOC3L4Q17RC7 722 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 PHLDB3Q6NSJ2 640 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 LRSAM1Q6UWE0 723 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 APTXQ7Z2E3 356 aaKnown RBP23.59■■□□□ 1.37
SNUPN-201ENST00000308588 GPR149Q86SP6 731 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 ARHGEF19Q8IW93 802 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 B3GALNT2Q8NCR0 500 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 MYCBPAPQ8TBZ2 947 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 SPPL2BQ8TCT7 592 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 C2orf15Q8WU43 125 aaKnown RBP23.59■■□□□ 1.37
SNUPN-201ENST00000308588 TWNKQ96RR1 684 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 PRKD2Q9BZL6 878 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 CISHQ9NSE2 258 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 ABI2Q9NYB9 513 aaPredicted RBP23.59■■□□□ 1.37
SNUPN-201ENST00000308588 HSFX1Q9UBD0 423 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 PCDHB5Q9Y5E4 795 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 INSL5Q9Y5Q6 135 aa23.59■■□□□ 1.37
SNUPN-201ENST00000308588 CILPO75339 1184 aa23.58■■□□□ 1.36
SNUPN-201ENST00000308588 PON1P27169 355 aa23.58■■□□□ 1.36
SNUPN-201ENST00000308588 KCNQ1P51787 676 aa23.58■■□□□ 1.36
SNUPN-201ENST00000308588 COPB1P53618 953 aaKnown RBP23.58■■□□□ 1.36
SNUPN-201ENST00000308588 MRPS5P82675 430 aaKnown RBP23.58■■□□□ 1.36
SNUPN-201ENST00000308588 ORC1Q13415 861 aa23.58■■□□□ 1.36
SNUPN-201ENST00000308588 AAK1Q2M2I8 961 aa23.58■■□□□ 1.36
SNUPN-201ENST00000308588 TRIM65Q6PJ69 517 aa23.58■■□□□ 1.36
SNUPN-201ENST00000308588 LUZP1Q86V48 1076 aa23.58■■□□□ 1.36
SNUPN-201ENST00000308588 CRYBG2Q8N1P7 616 aa23.58■■□□□ 1.36
SNUPN-201ENST00000308588 SUSD6Q92537 303 aa23.58■■□□□ 1.36
SNUPN-201ENST00000308588 FAM124BQ9H5Z6 455 aaPredicted RBP23.58■■□□□ 1.36
SNUPN-201ENST00000308588 USP15Q9Y4E8 981 aaPredicted RBP23.58■■□□□ 1.36
SNUPN-201ENST00000308588 PES1O00541 588 aaKnown RBP23.57■■□□□ 1.36
SNUPN-201ENST00000308588 TBXAS1P24557 533 aaPredicted RBP23.57■■□□□ 1.36
SNUPN-201ENST00000308588 MAPRE1Q15691 268 aaKnown RBP23.57■■□□□ 1.36
SNUPN-201ENST00000308588 MDH1BQ5I0G3 518 aa23.57■■□□□ 1.36
SNUPN-201ENST00000308588 PTCRAQ6ISU1 281 aaPredicted RBP23.57■■□□□ 1.36
SNUPN-201ENST00000308588 CES5AQ6NT32 575 aa23.57■■□□□ 1.36
SNUPN-201ENST00000308588 ACOT1Q86TX2 421 aa23.57■■□□□ 1.36
SNUPN-201ENST00000308588 PPM1KQ8N3J5 372 aa23.57■■□□□ 1.36
SNUPN-201ENST00000308588 UBR7Q8N806 425 aa23.57■■□□□ 1.36
SNUPN-201ENST00000308588 KAT5Q92993 513 aa23.57■■□□□ 1.36
SNUPN-201ENST00000308588 MYLPFQ96A32 169 aa23.57■■□□□ 1.36
SNUPN-201ENST00000308588 PCED1BQ96HM7 432 aa23.57■■□□□ 1.36
SNUPN-201ENST00000308588 TNIP3Q96KP6 325 aa23.57■■□□□ 1.36
SNUPN-201ENST00000308588 RHOBTB2Q9BYZ6 727 aa23.57■■□□□ 1.36
SNUPN-201ENST00000308588 YIPF1Q9Y548 306 aa23.57■■□□□ 1.36
SNUPN-201ENST00000308588 UNC80Q8N2C7 3258 aa23.56■■□□□ 1.36
SNUPN-201ENST00000308588 CCL16O15467 120 aa23.56■■□□□ 1.36
SNUPN-201ENST00000308588 APBA1Q02410 837 aa23.56■■□□□ 1.36
SNUPN-201ENST00000308588 GCNT1Q02742 428 aa23.56■■□□□ 1.36
SNUPN-201ENST00000308588 KCNMA1Q12791 1236 aa23.56■■□□□ 1.36
SNUPN-201ENST00000308588 PUS10Q3MIT2 529 aaKnown RBP23.56■■□□□ 1.36
SNUPN-201ENST00000308588 RRAGAQ7L523 313 aa23.56■■□□□ 1.36
SNUPN-201ENST00000308588 SPATA2LQ8IUW3 424 aaPredicted RBP23.56■■□□□ 1.36
SNUPN-201ENST00000308588 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.56■■□□□ 1.36
SNUPN-201ENST00000308588 ANKRD20A12PQ8NF67 263 aa23.56■■□□□ 1.36
SNUPN-201ENST00000308588 FAM200AQ8TCP9 573 aa23.56■■□□□ 1.36
SNUPN-201ENST00000308588 SMG7Q92540 1137 aaKnown RBP23.56■■□□□ 1.36
SNUPN-201ENST00000308588 ASB2Q96Q27 587 aa23.56■■□□□ 1.36
SNUPN-201ENST00000308588 NT5C1AQ9BXI3 368 aa23.56■■□□□ 1.36
SNUPN-201ENST00000308588 ELOVL4Q9GZR5 314 aa23.56■■□□□ 1.36
SNUPN-201ENST00000308588 ABCB6Q9NP58 842 aa23.56■■□□□ 1.36
SNUPN-201ENST00000308588 SOAT2O75908 522 aa23.55■■□□□ 1.36
SNUPN-201ENST00000308588 POU2F2P09086 479 aa23.55■■□□□ 1.36
SNUPN-201ENST00000308588 HAPLN1P10915 354 aaPredicted RBP23.55■■□□□ 1.36
SNUPN-201ENST00000308588 TUFMP49411 452 aaKnown RBP23.55■■□□□ 1.36
SNUPN-201ENST00000308588 TWF1Q12792 350 aa23.55■■□□□ 1.36
SNUPN-201ENST00000308588 CFAP221Q4G0U5 840 aa23.55■■□□□ 1.36
SNUPN-201ENST00000308588 DPY19L2P1Q6NXN4 242 aa23.55■■□□□ 1.36
SNUPN-201ENST00000308588 CYP26C1Q6V0L0 522 aa23.55■■□□□ 1.36
SNUPN-201ENST00000308588 TTC39CQ8N584 583 aa23.55■■□□□ 1.36
SNUPN-201ENST00000308588 FUBP3Q96I24 572 aaKnown RBP eCLIP23.55■■□□□ 1.36
SNUPN-201ENST00000308588 KREMEN1Q96MU8 473 aa23.55■■□□□ 1.36
SNUPN-201ENST00000308588 TSPY26PQ9H489 355 aa23.55■■□□□ 1.36
SNUPN-201ENST00000308588 SIX2Q9NPC8 291 aa23.55■■□□□ 1.36
SNUPN-201ENST00000308588 LRG1P02750 347 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 TPM2P07951 284 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 ACO1P21399 889 aaKnown RBP23.54■■□□□ 1.36
SNUPN-201ENST00000308588 CYP2F1P24903 491 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 ZNF445P59923 1031 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 SMAD2Q15796 467 aaKnown RBP23.54■■□□□ 1.36
SNUPN-201ENST00000308588 MGAT5BQ3V5L5 792 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 ZNF394Q53GI3 561 aa23.54■■□□□ 1.36
SNUPN-201ENST00000308588 ATAT1Q5SQI0 421 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms