RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 BCO2Q9BYV7 579 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 RHOBTB2Q9BYZ6 727 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 POMKQ9H5K3 350 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CYP3A43Q9HB55 503 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 APOBEC3GQ9HC16 384 aaKnown RBP11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 GCNT4Q9P109 453 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 HSFX1Q9UBD0 423 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PRKAG3Q9UGI9 489 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 COQ4Q9Y3A0 265 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 NR2E1Q9Y466 385 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CLUHO75153 1309 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 REV3LO60673 3130 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PATJQ8NI35 1801 aa11.74□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SMTNL1A8MU46 457 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 HCRTO43612 131 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SEC24AO95486 1093 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CD58P19256 250 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 LMO2P25791 158 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 EEF1GP26641 437 aaKnown RBP11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CDH8P55286 799 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 LRMPQ12912 555 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TAF12Q16514 161 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MDH1BQ5I0G3 518 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ITIH5Q86UX2 942 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 UNC93AQ86WB7 457 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 AOPEPQ8N6M6 819 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TDRD5Q8NAT2 981 aaKnown RBP11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ATAD1Q8NBU5 361 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 B3GALNT2Q8NCR0 500 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 DOCK8Q8NF50 2099 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ADAMTS19Q8TE59 1207 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SEMA4DQ92854 862 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MYLPFQ96A32 169 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 FUBP3Q96I24 572 aaKnown RBP eCLIP11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ZNF512Q96ME7 567 aaPredicted RBP11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TUBGCP2Q9BSJ2 902 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SDCBP2Q9H190 292 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 FAM124BQ9H5Z6 455 aaPredicted RBP11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ABCB6Q9NP58 842 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SAMSN1Q9NSI8 373 aaKnown RBP11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CDH22Q9UJ99 828 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 GTF3C4Q9UKN8 822 aa11.73□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 NOTCH4Q99466 2003 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 NUP210Q8TEM1 1887 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MYBPHLA2RUH7 354 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 BECN2A8MW95 431 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 BMP1P13497 986 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PTPN1P18031 435 aaKnown RBP11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SP100P23497 879 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ANXA13P27216 316 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SSTR3P32745 418 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CDR1P51861 262 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 NDST1P52848 882 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 RPL10AP62906 217 aaKnown RBP11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TPM4P67936 248 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 INCA1Q0VD86 236 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CUL2Q13617 745 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 NFKBIBQ15653 356 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PABPC1LQ4VXU2 614 aaKnown RBP11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TCP11X2Q5H9J9 407 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 GBP6Q6ZN66 633 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 GET4Q7L5D6 327 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 GRASPQ7Z6J2 395 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 LRRTM3Q86VH5 581 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ADHFE1Q8IWW8 467 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PPM1KQ8N3J5 372 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TTC9BQ8N6N2 239 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MYCBPAPQ8TBZ2 947 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ZNF707Q96C28 371 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ACSF2Q96CM8 615 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 UHRF1Q96T88 793 aaPredicted RBP11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MED10Q9BTT4 135 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 NT5C1AQ9BXI3 368 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 DPEP3Q9H4B8 488 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 WDR6Q9NNW5 1121 aaKnown RBP11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ASAH2Q9NR71 780 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TMLHEQ9NVH6 421 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SLC27A5Q9Y2P5 690 aa11.72□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TRIM66O15016 1216 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ATP2C2O75185 946 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 LRRN2O75325 713 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CILPO75339 1184 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PAPLNO95428 1278 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 VNN2O95498 520 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 RHOP08100 348 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 HAPLN1P10915 354 aaPredicted RBP11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PTPN2P17706 415 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CDK11BP21127 795 aaKnown RBP11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 FSHRP23945 695 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 GBP2P32456 591 aaPredicted RBP11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 EXOC3L4Q17RC7 722 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ZSCAN23Q3MJ62 389 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CFAP221Q4G0U5 840 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 VWA3BQ502W6 1294 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CYP4A22Q5TCH4 519 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 FAM171BQ6P995 826 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 VSTM1Q6UX27 236 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PDZD4Q76G19 769 aaPredicted RBP11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 OTOP3Q7RTS5 596 aa11.71□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ACOT1Q86TX2 421 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms