RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 FMO2Q99518 471 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 TCRBV5S4A2TA0A5A2 114 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 SPAG7O75391 227 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 AKT1P31749 480 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 TRPC1P48995 793 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 FMO5P49326 533 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 PEX6Q13608 980 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 PGM5Q15124 567 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 TMEM86AQ8N2M4 240 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 TTC17Q96AE7 1141 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 TMEM161AQ9NX61 479 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 BFARQ9NZS9 450 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 TRPV2Q9Y5S1 764 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 NEK2P51955 445 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 TMPRSS15P98073 1019 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 TBC1D1Q86TI0 1168 aaPredicted RBP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 NUDCD3Q8IVD9 361 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 OR6P1Q8NGX9 317 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 N4BP2Q86UW6 1770 aaPredicted RBP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 COL16A1Q07092 1604 aaPredicted RBP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 COL22A1Q8NFW1 1626 aaPredicted RBP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 FAM107AO95990 144 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 KCNA2P16389 499 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 GIT2Q14161 759 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 PTGISQ16647 500 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 UGP2Q16851 508 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 METTL3Q86U44 580 aaKnown RBP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 SPIRE2Q8WWL2 714 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 ZNF556Q9HAH1 456 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 PAPOLBQ9NRJ5 636 aaKnown RBP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 PRR23D1E9PI22 279 aaPredicted RBP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 PRR23D2P0DMB1 279 aaPredicted RBP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 PSEN2P49810 448 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 BCAT1P54687 386 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 SPARCL1Q14515 664 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 POLD3Q15054 466 aaPredicted RBP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 GRAMD1BQ3KR37 738 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 PLPPR4Q7Z2D5 763 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 ZNF438Q7Z4V0 828 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 BTBD6Q96KE9 485 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 REEP2Q9BRK0 252 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 NSMCE4AQ9NXX6 385 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 LRRC53A6NM62 1247 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 APOA1P02647 267 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 CCDC85BQ15834 202 aaPredicted RBP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 CENPPQ6IPU0 288 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 TMEM143Q96AN5 459 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 KRCC1Q9NPI7 259 aaPredicted RBP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 PCDHA13Q9Y5I0 950 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 TRIP11Q15643 1979 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 SSU72P8A0A1W2PR75 194 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 GRID2IPA4D2P6 1211 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 PHF20L1A8MW92 1017 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 LSM8O95777 96 aaKnown RBP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 HMOX2P30519 316 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 SERPINB10P48595 397 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 TPI1P60174 286 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 POU5F1BQ06416 359 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 MFSD10Q14728 455 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 ZKSCAN8Q15776 578 aaPredicted RBP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 GRIK4Q16099 956 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 DDX42Q86XP3 938 aaKnown RBP eCLIP8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 AIFM3Q96NN9 605 aa8.7□□□□□ -1.02
PCDHB1-201ENST00000306549 ADCY6O43306 1168 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 DR1Q01658 176 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 PPIGQ13427 754 aaKnown RBP eCLIP8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 HDAC6Q9UBN7 1215 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 ITIH6Q6UXX5 1313 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 NCAM2O15394 837 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 ANXA11P50995 505 aaKnown RBP8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 ZNF280AP59817 542 aaPredicted RBP8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 MRPL28Q13084 256 aaKnown RBP8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 KSR1Q8IVT5 923 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 UNC45BQ8IWX7 931 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 PPTC7Q8NI37 304 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 RFFLQ8WZ73 363 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 CACNA2D2Q9NY47 1150 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 ATP11BQ9Y2G3 1177 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 ANO9A1A5B4 782 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 RSPH10B2B2RC85 870 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 CTSHP09668 335 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 RSPH10BP0C881 870 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 DRAP1Q14919 205 aaPredicted RBP8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 ACER1Q8TDN7 264 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 PLEKHA5Q9HAU0 1116 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 CDC23Q9UJX2 597 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 MSH4O15457 936 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 KLRC1P26715 233 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 RPL9P32969 192 aaKnown RBP8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 PSEN1P49768 467 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 PPP1R14AQ96A00 147 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 DPP3Q9NY33 737 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 SNX9Q9Y5X1 595 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 SFI1A8K8P3 1242 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 APOL1O14791 398 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 ATP5HO75947 161 aa8.69□□□□□ -1.02
PCDHB1-201ENST00000306549 BCAR1P56945 870 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms