RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 ECEL1O95672 775 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 LSM8O95777 96 aaKnown RBP12.04□□□□□ -0.48
SCG2-201ENST00000305409 SHBGP04278 402 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 PDGFRBP09619 1106 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 KRT3P12035 628 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 PSMA2P25787 234 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 GRM5P41594 1212 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 DYNLT1P63172 113 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 SNX17Q15036 470 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 TAF5Q15542 800 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 FSCN1Q16658 493 aaKnown RBP12.04□□□□□ -0.48
SCG2-201ENST00000305409 ZNF618Q5T7W0 954 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 SLC27A1Q6PCB7 646 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 CXCL17Q6UXB2 119 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 ARFGAP1Q8N6T3 406 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 DCLK3Q9C098 648 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 SCN1AP35498 2009 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 H0YGN5 161 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 CTSHP09668 335 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 HSPA6P17066 643 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 IL1R2P27930 398 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 HPDP32754 393 aaPredicted RBP12.03□□□□□ -0.48
SCG2-201ENST00000305409 YWHAEP62258 255 aaKnown RBP12.03□□□□□ -0.48
SCG2-201ENST00000305409 NFX1Q12986 1120 aaKnown RBP12.03□□□□□ -0.48
SCG2-201ENST00000305409 CYP1B1Q16678 543 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 CCDC142Q17RM4 750 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 B4GALNT4Q76KP1 1039 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 C7orf31Q8N865 590 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 USP6NLQ92738 828 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 LRRC45Q96CN5 670 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 SEMA4AQ9H3S1 761 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 DPEP3Q9H4B8 488 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 ABT1Q9ULW3 272 aaKnown RBP12.03□□□□□ -0.48
SCG2-201ENST00000305409 GABRQQ9UN88 632 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 NFS1Q9Y697 457 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 LRRD1A4D1F6 860 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 MEIS3P2A8K0S8 358 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 RGS2P41220 211 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 ZNF844Q08AG5 666 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 GNASQ5JWF2 1037 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 PPP1R15BQ5SWA1 713 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 NOTUMQ6P988 496 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 XYLT1Q86Y38 959 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 GLIS1Q8NBF1 620 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 C3orf20Q8ND61 904 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 SNX27Q96L92 541 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 PLVAPQ9BX97 442 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 LRRC19Q9H756 370 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 TSPAN16Q9UKR8 245 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 ITGA11Q9UKX5 1188 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 BARX2Q9UMQ3 279 aaPredicted RBP12.03□□□□□ -0.48
SCG2-201ENST00000305409 C2CD2Q9Y426 696 aa12.03□□□□□ -0.48
SCG2-201ENST00000305409 SMIM35A0A1B0GVV1 85 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 MBLAC1A4D2B0 266 aaPredicted RBP12.02□□□□□ -0.48
SCG2-201ENST00000305409 DCDC2CA8MYV0 355 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 PSTPIP1O43586 416 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 CD48P09326 243 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 ZSCAN5DPP0CG00 497 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 ETS1P14921 441 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 CDH5P33151 784 aaPredicted RBP12.02□□□□□ -0.48
SCG2-201ENST00000305409 YARSP54577 528 aaKnown RBP12.02□□□□□ -0.48
SCG2-201ENST00000305409 CAP1Q01518 475 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 PDCLQ13371 301 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 PPP2R5EQ16537 467 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 CDO1Q16878 200 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 ODF2Q5BJF6 829 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 FAM47CQ5HY64 1035 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 PPP1R26Q5T8A7 1209 aaPredicted RBP12.02□□□□□ -0.48
SCG2-201ENST00000305409 FOXR1Q6PIV2 292 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 TAB3Q8N5C8 712 aaPredicted RBP12.02□□□□□ -0.48
SCG2-201ENST00000305409 ARRDC4Q8NCT1 418 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 OSBPL7Q9BZF2 842 aa12.02□□□□□ -0.48
SCG2-201ENST00000305409 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.02□□□□□ -0.48
SCG2-201ENST00000305409 C17orf102A2RUQ5 167 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 GOLGA8KD6RF30 607 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 SPTLC1O15269 473 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 MED7O43513 233 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 ATICP31939 592 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 GPD2P43304 727 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 CPT1AP50416 773 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 ADAM17P78536 824 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 KLF1Q13351 362 aaPredicted RBP12.02□□□□□ -0.49
SCG2-201ENST00000305409 FAM102AQ5T9C2 384 aaPredicted RBP12.02□□□□□ -0.49
SCG2-201ENST00000305409 KATNAL2Q8IYT4 538 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 OR6B3Q8NGW1 331 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 WNT8BQ93098 351 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 SLITRK1Q96PX8 696 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 ZNF518BQ9C0D4 1074 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 ZFYVE28Q9HCC9 887 aa12.02□□□□□ -0.49
SCG2-201ENST00000305409 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.02□□□□□ -0.49
SCG2-201ENST00000305409 TLDC2A0PJX2 215 aa12.01□□□□□ -0.49
SCG2-201ENST00000305409 E5RJQ4 531 aa12.01□□□□□ -0.49
SCG2-201ENST00000305409 PODXLO00592 558 aa12.01□□□□□ -0.49
SCG2-201ENST00000305409 PAEPP09466 180 aa12.01□□□□□ -0.49
SCG2-201ENST00000305409 P4HA1P13674 534 aa12.01□□□□□ -0.49
SCG2-201ENST00000305409 LMO2P25791 158 aa12.01□□□□□ -0.49
SCG2-201ENST00000305409 CHKAP35790 457 aa12.01□□□□□ -0.49
SCG2-201ENST00000305409 FNTAP49354 379 aa12.01□□□□□ -0.49
SCG2-201ENST00000305409 AFF1P51825 1210 aaKnown RBP12.01□□□□□ -0.49
SCG2-201ENST00000305409 PURAQ00577 322 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms