RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 OTOP1Q7RTM1 612 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 POU5F2Q8N7G0 328 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 UNC45AQ9H3U1 944 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 PCMTD2Q9NV79 361 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 CYP3A7-CYP3A51PA0A087WV96 503 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 ARHGAP10A1A4S6 786 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 CYP3A7P24462 503 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 QARSP47897 775 aaKnown RBP13.65□□□□□ -0.22
TRIM35-201ENST00000305364 MTMR2Q13614 643 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 FEZF2Q8TBJ5 459 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 ANLNQ9NQW6 1124 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 HNRNPRO43390 633 aaKnown RBP13.65□□□□□ -0.22
TRIM35-201ENST00000305364 TCEA3O75764 348 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 STK10O94804 968 aaKnown RBP13.65□□□□□ -0.22
TRIM35-201ENST00000305364 RTP1P59025 263 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 CYLC2Q14093 348 aaPredicted RBP13.65□□□□□ -0.22
TRIM35-201ENST00000305364 CYTH1Q15438 398 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 CNPY1Q3B7I2 92 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 SLC10A5Q5PT55 438 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 NXNQ6DKJ4 435 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 TMEM179Q6ZVK1 233 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 DRAXINQ8NBI3 349 aaPredicted RBP13.65□□□□□ -0.22
TRIM35-201ENST00000305364 COMMD3-BMI1R4GMX3 469 aa13.65□□□□□ -0.22
TRIM35-201ENST00000305364 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.64□□□□□ -0.23
TRIM35-201ENST00000305364 FKBP6O75344 327 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 ARP10275 920 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 RHBDL3P58872 404 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 TAS2R40P59535 323 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 EFHC1Q5JVL4 640 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 SV2AQ7L0J3 742 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 TTC13Q8NBP0 860 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 SHC3Q92529 594 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 TUBGCP5Q96RT8 1024 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 KLHL4Q9C0H6 718 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 ATXN10Q9UBB4 475 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 SHOC2Q9UQ13 582 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 PDE5AO76074 875 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 CLPTM1O96005 669 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 POLR2BP30876 1174 aaKnown RBP13.64□□□□□ -0.23
TRIM35-201ENST00000305364 ATXN3P54252 364 aaPredicted RBP13.64□□□□□ -0.23
TRIM35-201ENST00000305364 MOGSQ13724 837 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 SESTD1Q86VW0 696 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 FAM71DQ8N9W8 422 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 FAM84AQ96KN4 292 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 SAE1Q9UBE0 346 aaPredicted RBP13.64□□□□□ -0.23
TRIM35-201ENST00000305364 BCAP29Q9UHQ4 241 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 T-ENOLP0DO92 83 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 EIF3EP60228 445 aaKnown RBP13.64□□□□□ -0.23
TRIM35-201ENST00000305364 KRT81Q14533 505 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 IYDQ6PHW0 289 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 LINC00116Q8NCU8 138 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 TSNARE1Q96NA8 513 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 CRAMP1Q96RY5 1269 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
TRIM35-201ENST00000305364 NOP56O00567 594 aaKnown RBP13.63□□□□□ -0.23
TRIM35-201ENST00000305364 CASQ2O14958 399 aaPredicted RBP13.63□□□□□ -0.23
TRIM35-201ENST00000305364 CCNFP41002 786 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 RSPH3Q86UC2 560 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 NDUFAF2Q8N183 169 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 RBM15BQ8NDT2 890 aaKnown RBP13.63□□□□□ -0.23
TRIM35-201ENST00000305364 TIPINQ9BVW5 301 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 LNPEPQ9UIQ6 1025 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 CCPG1Q9ULG6 757 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 LRRIQ4A6NIV6 560 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 KRT19P08727 400 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 FAAP100Q0VG06 881 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 KCNT1Q5JUK3 1230 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 SCARA5Q6ZMJ2 495 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 TRIM72Q6ZMU5 477 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 ULK2Q8IYT8 1036 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 GALNT4Q8N4A0 578 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 OR6Y1Q8NGX8 325 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 AGR3Q8TD06 166 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 GDPD5Q8WTR4 605 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 DEPDC1BQ8WUY9 529 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 MIPEPQ99797 713 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 DDX4Q9NQI0 724 aaKnown RBP13.63□□□□□ -0.23
TRIM35-201ENST00000305364 GJA3Q9Y6H8 435 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 SNRPAP09012 282 aaKnown RBP13.63□□□□□ -0.23
TRIM35-201ENST00000305364 TPP2P29144 1249 aaPredicted RBP13.63□□□□□ -0.23
TRIM35-201ENST00000305364 SHMT1P34896 483 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 ECE1P42892 770 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 VCPP55072 806 aaKnown RBP13.63□□□□□ -0.23
TRIM35-201ENST00000305364 OTUD4Q01804 1114 aaKnown RBP13.63□□□□□ -0.23
TRIM35-201ENST00000305364 KRT80Q6KB66 452 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 TMEM35BQ8NCS4 154 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 ACTL9Q8TC94 416 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 PTPRN2Q92932 1015 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 CNBD2Q96M20 576 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 HSD17B14Q9BPX1 270 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 DTNAQ9Y4J8 743 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 BHMG1C9JSJ3 638 aaPredicted RBP13.63□□□□□ -0.23
TRIM35-201ENST00000305364 RBP3P10745 1247 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 YWHABP31946 246 aaKnown RBP13.63□□□□□ -0.23
TRIM35-201ENST00000305364 SCNN1BP51168 640 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 SLC25A3Q00325 362 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 PLA2G4FQ68DD2 849 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 SPOCD1Q6ZMY3 1216 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 GPD1LQ8N335 351 aa13.63□□□□□ -0.23
TRIM35-201ENST00000305364 KCTD17Q8N5Z5 321 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms