RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 SNX5Q9Y5X3 404 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 ANKRD26Q9UPS8 1709 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 A0A0U1RQJ8 604 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 SRRM3A6NNA2 597 aaPredicted RBP20.15■□□□□ 0.82
TSR1-201ENST00000301364 FDFT1P37268 417 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 MROH9Q5TGP6 573 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 PRUNE1Q86TP1 453 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 POP1Q99575 1024 aaKnown RBP20.15■□□□□ 0.82
TSR1-201ENST00000301364 TASP1Q9H6P5 420 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 KIF9Q9HAQ2 790 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 FAM49BQ9NUQ9 324 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 RARRES1P49788 294 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 OTUD4Q01804 1114 aaKnown RBP20.15■□□□□ 0.82
TSR1-201ENST00000301364 GCNT1Q02742 428 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 OCA2Q04671 838 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 PDK2Q15119 407 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 C2CD6Q53TS8 623 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 MCOLN2Q8IZK6 566 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 MREGQ8N565 214 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 ATXN2LQ8WWM7 1075 aaKnown RBP20.15■□□□□ 0.82
TSR1-201ENST00000301364 VCPIP1Q96JH7 1222 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 WARS2Q9UGM6 360 aaKnown RBP20.15■□□□□ 0.82
TSR1-201ENST00000301364 BAZ2BQ9UIF8 2168 aaKnown RBP20.15■□□□□ 0.82
TSR1-201ENST00000301364 UBOX5O94941 541 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 ABRAQ8N0Z2 381 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 PTPRN2Q92932 1015 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 ULK4Q96C45 1275 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 ACSF2Q96CM8 615 aaPredicted RBP20.15■□□□□ 0.82
TSR1-201ENST00000301364 SUFUQ9UMX1 484 aa20.15■□□□□ 0.82
TSR1-201ENST00000301364 ARHGAP23Q9P227 1491 aa20.14■□□□□ 0.82
TSR1-201ENST00000301364 SYF2O95926 243 aaKnown RBP20.14■□□□□ 0.82
TSR1-201ENST00000301364 SUPT20HL2P0C7V6 817 aa20.14■□□□□ 0.82
TSR1-201ENST00000301364 RPS12P25398 132 aaKnown RBP20.14■□□□□ 0.82
TSR1-201ENST00000301364 SLC30A9Q6PML9 568 aa20.14■□□□□ 0.82
TSR1-201ENST00000301364 SCFD2Q8WU76 684 aa20.14■□□□□ 0.82
TSR1-201ENST00000301364 SLC5A5Q92911 643 aa20.14■□□□□ 0.82
TSR1-201ENST00000301364 NAALADL1Q9UQQ1 740 aa20.14■□□□□ 0.82
TSR1-201ENST00000301364 BTNL10A8MVZ5 291 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 RPL21P46778 160 aaKnown RBP20.14■□□□□ 0.81
TSR1-201ENST00000301364 TRIP10Q15642 601 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 GOLGA7BQ2TAP0 167 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 APLFQ8IW19 511 aaPredicted RBP20.14■□□□□ 0.81
TSR1-201ENST00000301364 SHOC2Q9UQ13 582 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 E5RI56 91 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 PDGFRBP09619 1106 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 DDIASQ8IXT1 998 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 DCLK3Q9C098 648 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 KCNQ5Q9NR82 932 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 FAM8A1Q9UBU6 413 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 HAO1Q9UJM8 370 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 VDRP11473 427 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 ERFP50548 548 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 DEFB129Q9H1M3 183 aa20.14■□□□□ 0.81
TSR1-201ENST00000301364 PIK3CDO00329 1044 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 NEMP1O14524 444 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 ITGB3P05106 788 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 ENO3P13929 434 aaPredicted RBP20.13■□□□□ 0.81
TSR1-201ENST00000301364 OVGP1Q12889 678 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 INPP5AQ14642 412 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 ANO4Q32M45 955 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 NIPA1Q7RTP0 329 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 PAFAH2Q99487 392 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 PCDH9Q9HC56 1237 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 TM9SF1O15321 606 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 ANP32DO95626 131 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 PYGMP11217 842 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 TCF7P36402 384 aaPredicted RBP20.13■□□□□ 0.81
TSR1-201ENST00000301364 AMPD2Q01433 879 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 OR6J1Q8NGC5 347 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 NAT9Q9BTE0 207 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 VIL1P09327 827 aaKnown RBP20.13■□□□□ 0.81
TSR1-201ENST00000301364 ABCE1P61221 599 aaKnown RBP20.13■□□□□ 0.81
TSR1-201ENST00000301364 ARHGEF6Q15052 776 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 IMPG1Q17R60 797 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 TMEM259Q4ZIN3 620 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 CYP2W1Q8TAV3 490 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 PDCD2LQ9BRP1 358 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 DCLRE1BQ9H816 532 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 AVENQ9NQS1 362 aaPredicted RBP20.13■□□□□ 0.81
TSR1-201ENST00000301364 ANGPT2O15123 496 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 TRAPPC3O43617 180 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 RPS6KA5O75582 802 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 NLRP11P59045 1033 aaKnown RBP20.13■□□□□ 0.81
TSR1-201ENST00000301364 ZNF235Q14590 738 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 IL17AQ16552 155 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 SPIRE2Q8WWL2 714 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 MTMR12Q9C0I1 747 aa20.13■□□□□ 0.81
TSR1-201ENST00000301364 C20orf96Q9NUD7 363 aaPredicted RBP20.13■□□□□ 0.81
TSR1-201ENST00000301364 GLRA3O75311 464 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 CYP3A4P08684 503 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 CRYMQ14894 314 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 TMEM139Q8IV31 216 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 ATPAF2Q8N5M1 289 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 COPAP53621 1224 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 WDR49Q8IV35 697 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 CALML6Q8TD86 181 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 SYTL5Q8TDW5 730 aaPredicted RBP20.12■□□□□ 0.81
TSR1-201ENST00000301364 TFB1MQ8WVM0 346 aaKnown RBP20.12■□□□□ 0.81
TSR1-201ENST00000301364 BAP1Q92560 729 aa20.12■□□□□ 0.81
TSR1-201ENST00000301364 CCDC134Q9H6E4 229 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms