RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 KIAA1586Q9HCI6 787 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 ALG13Q9NP73 1137 aaKnown RBP14.16□□□□□ -0.14
CTDP1-202ENST00000299543 CHCHD3Q9NX63 227 aaKnown RBP14.16□□□□□ -0.14
CTDP1-202ENST00000299543 SCINQ9Y6U3 715 aa14.16□□□□□ -0.14
CTDP1-202ENST00000299543 PIK3R2O00459 728 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 ZC3H11AO75152 810 aaKnown RBP eCLIP14.15□□□□□ -0.14
CTDP1-202ENST00000299543 STBD1O95210 358 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 SUPT20HL2P0C7V6 817 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 ACO1P21399 889 aaKnown RBP14.15□□□□□ -0.14
CTDP1-202ENST00000299543 IL9RQ01113 521 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 CAV1Q03135 178 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 SUPT20HL1Q3ZLR7 823 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 ABHD15Q6UXT9 468 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 ZNF677Q86XU0 584 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 MYLK4Q86YV6 388 aaPredicted RBP14.15□□□□□ -0.14
CTDP1-202ENST00000299543 FITM2Q8N6M3 262 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 ARL2BPQ9Y2Y0 163 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 TJP3O95049 919 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 EDN1P05305 212 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 FOXN2P32314 431 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 MSH2P43246 934 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 RAD23BP54727 409 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 SYDE1Q6ZW31 735 aaPredicted RBP14.15□□□□□ -0.14
CTDP1-202ENST00000299543 GALNT15Q8N3T1 639 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 FBF1Q8TES7 1133 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 CYP39A1Q9NYL5 469 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 IP6K2Q9UHH9 426 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 PGAP2Q9UHJ9 254 aa14.15□□□□□ -0.14
CTDP1-202ENST00000299543 PSTPIP1O43586 416 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 GAD2Q05329 585 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 KLF1Q13351 362 aaPredicted RBP14.14□□□□□ -0.15
CTDP1-202ENST00000299543 ZNF449Q6P9G9 518 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 BBOF1Q8ND07 529 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 EXD1Q8NHP7 514 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 FAM81AQ8TBF8 368 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 CFAP57Q96MR6 1250 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 TMEM237Q96Q45 408 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 C12orf65Q9H3J6 166 aaKnown RBP14.14□□□□□ -0.15
CTDP1-202ENST00000299543 TRABDQ9H4I3 376 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 COQ9O75208 318 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 TPP2P29144 1249 aaPredicted RBP14.14□□□□□ -0.15
CTDP1-202ENST00000299543 HIRAP54198 1017 aaPredicted RBP14.14□□□□□ -0.15
CTDP1-202ENST00000299543 STAT4Q14765 748 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 CCDC6Q16204 474 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 WDR78Q5VTH9 848 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 C15orf39Q6ZRI6 1047 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 EMC1Q8N766 993 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 ACAD9Q9H845 621 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 MAP3K20Q9NYL2 800 aaKnown RBP14.14□□□□□ -0.15
CTDP1-202ENST00000299543 TJP2Q9UDY2 1190 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 FAM47DPA6NHR8 397 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 H0YCG3 227 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 CSDE1O75534 798 aaKnown RBP14.14□□□□□ -0.15
CTDP1-202ENST00000299543 OATP04181 439 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 SPATA31D3P0C874 917 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 ETS2P15036 469 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 CCND1P24385 295 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 GCLCP48506 637 aaPredicted RBP14.14□□□□□ -0.15
CTDP1-202ENST00000299543 SLFN12LQ6IEE8 588 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 SPATA31D4Q6ZUB0 917 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 KATNAL2Q8IYT4 538 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 RDM1Q8NG50 284 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 SLCO2A1Q92959 643 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 SMC6Q96SB8 1091 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 TSPYL2Q9H2G4 693 aaPredicted RBP14.14□□□□□ -0.15
CTDP1-202ENST00000299543 ETNK1Q9HBU6 452 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 WDR35Q9P2L0 1181 aa14.14□□□□□ -0.15
CTDP1-202ENST00000299543 LIASO43766 372 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 GM2AP17900 193 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 RAP1GAPP47736 663 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 GMPSP49915 693 aaPredicted RBP14.13□□□□□ -0.15
CTDP1-202ENST00000299543 NRLP54845 237 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 COPS2P61201 443 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 OGDHQ02218 1023 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 STXBP2Q15833 593 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 TNFAIP8L3Q5GJ75 292 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 RASIP1Q5U651 963 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 MTHFD1LQ6UB35 978 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 TRIM50Q86XT4 487 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 CCNJLQ8IV13 435 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 PRPF31Q8WWY3 499 aaKnown RBP14.13□□□□□ -0.15
CTDP1-202ENST00000299543 CDHR1Q96JP9 859 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 DDX50Q9BQ39 737 aaKnown RBP14.13□□□□□ -0.15
CTDP1-202ENST00000299543 TEX13BQ9BXU2 312 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 RHBDL2Q9NX52 303 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 ZNF214Q9UL59 606 aaPredicted RBP14.13□□□□□ -0.15
CTDP1-202ENST00000299543 COL2A1P02458 1487 aaPredicted RBP14.13□□□□□ -0.15
CTDP1-202ENST00000299543 A0A1W2PPM1 405 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 ATP2A1O14983 1001 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 MAFGO15525 162 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 GJB1P08034 283 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 SP100P23497 879 aaPredicted RBP14.13□□□□□ -0.15
CTDP1-202ENST00000299543 PSMA2P25787 234 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 SSTR1P30872 391 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 WDR4P57081 412 aaKnown RBP14.13□□□□□ -0.15
CTDP1-202ENST00000299543 RIPK1Q13546 671 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 MUM1Q2TAK8 710 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 BBS9Q3SYG4 887 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 PLEKHA7Q6IQ23 1121 aa14.13□□□□□ -0.15
CTDP1-202ENST00000299543 DLK2Q6UY11 383 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms