RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 LRRN4Q8WUT4 740 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 PRPF31Q8WWY3 499 aaKnown RBP25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 LRRC37BQ96QE4 947 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 WDR83Q9BRX9 315 aaKnown RBP25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 EBF2Q9HAK2 575 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 NKX1-2Q9UD57 310 aaPredicted RBP25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 CYTH4Q9UIA0 394 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 FER1L6Q2WGJ9 1857 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 SKAP2O75563 359 aaPredicted RBP25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 ABHD2P08910 425 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 GNPTABQ3T906 1256 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 CENPUQ71F23 418 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 TRIM50Q86XT4 487 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 ADGRA2Q96PE1 1338 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 ASS1P00966 412 aaKnown RBP25.66■■□□□ 1.7
SPTSSA-201ENST00000298130 ZNF132P52740 706 aa25.66■■□□□ 1.7
SPTSSA-201ENST00000298130 LMNB2Q03252 620 aa25.66■■□□□ 1.7
SPTSSA-201ENST00000298130 MAPK6Q16659 721 aa25.66■■□□□ 1.7
SPTSSA-201ENST00000298130 BBS9Q3SYG4 887 aa25.66■■□□□ 1.7
SPTSSA-201ENST00000298130 SLFN12LQ6IEE8 588 aa25.66■■□□□ 1.7
SPTSSA-201ENST00000298130 FBF1Q8TES7 1133 aa25.66■■□□□ 1.7
SPTSSA-201ENST00000298130 ACTL7BQ9Y614 415 aa25.66■■□□□ 1.7
SPTSSA-201ENST00000298130 TCRBV5S1A1TA0A578 114 aa25.66■■□□□ 1.7
SPTSSA-201ENST00000298130 HIF1AQ16665 826 aa25.66■■□□□ 1.7
SPTSSA-201ENST00000298130 C3orf62Q6ZUJ4 267 aa25.66■■□□□ 1.7
SPTSSA-201ENST00000298130 H0YCG3 227 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 ALOX15BO15296 676 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 KRT19P08727 400 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 PTPRAP18433 802 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 SETDB1Q15047 1291 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 PTPN20Q4JDL3 420 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 OTOAQ7RTW8 1153 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 TMEM35BQ8NCS4 154 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 PYROXD1Q8WU10 500 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 ZNF570Q96NI8 536 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 PCYT2Q99447 389 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 SLC17A7Q9P2U7 560 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 MAFBQ9Y5Q3 323 aaPredicted RBP25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 MYH9P35579 1960 aaKnown RBP25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 ALADP13716 330 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 MOGSQ13724 837 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 MORF4L2Q15014 288 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 RAB6CQ53S08 254 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 UNC45BQ8IWX7 931 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 MICALL2Q8IY33 904 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 CPT1BQ92523 772 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 RAB6CQ9H0N0 254 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 ACAD9Q9H845 621 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 CNTN6Q9UQ52 1028 aa25.65■■□□□ 1.7
SPTSSA-201ENST00000298130 CALB1P05937 261 aa25.64■■□□□ 1.7
SPTSSA-201ENST00000298130 PLEKHG4Q58EX7 1191 aa25.64■■□□□ 1.7
SPTSSA-201ENST00000298130 XRRA1Q6P2D8 792 aa25.64■■□□□ 1.7
SPTSSA-201ENST00000298130 FBXO36Q8NEA4 188 aa25.64■■□□□ 1.7
SPTSSA-201ENST00000298130 HSPH1Q92598 858 aa25.64■■□□□ 1.7
SPTSSA-201ENST00000298130 UBN1Q9NPG3 1134 aa25.64■■□□□ 1.7
SPTSSA-201ENST00000298130 PICK1Q9NRD5 415 aa25.64■■□□□ 1.7
SPTSSA-201ENST00000298130 H0Y3Z8 333 aa25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 EDF1O60869 148 aaKnown RBP25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 CSDE1O75534 798 aaKnown RBP25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 MAP3K6O95382 1288 aa25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 LDHAP00338 332 aaKnown RBP25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 CCNB1P14635 433 aa25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 HMGB2P26583 209 aaKnown RBP25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 LACTBP83111 547 aaPredicted RBP25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 TRPC3Q13507 836 aa25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 DLK2Q6UY11 383 aa25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 FAM71DQ8N9W8 422 aa25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 JDP2Q8WYK2 163 aa25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 NOP53Q9NZM5 478 aaKnown RBP25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 RABGEF1Q9UJ41 708 aa25.64■■□□□ 1.69
SPTSSA-201ENST00000298130 TMEM63AO94886 807 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 EPHB2P29323 1055 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 TNFAIP1Q13829 316 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 PDK4Q16654 411 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 ZNF75CPQ92670 426 aaPredicted RBP25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 TEX13BQ9BXU2 312 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 STARD13Q9Y3M8 1113 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 NFASCO94856 1347 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 TYROBPO43914 113 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 LRCH4O75427 683 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 BASP1P80723 227 aaKnown RBP25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 ATP11AP98196 1134 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 NPNTQ6UXI9 565 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 TMEM192Q8IY95 271 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 TTC25Q96NG3 672 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 GINM1Q9NU53 330 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 PSMC3IPQ9P2W1 217 aaPredicted RBP25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 CHMP2BQ9UQN3 213 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 AFG3L2Q9Y4W6 797 aa25.63■■□□□ 1.69
SPTSSA-201ENST00000298130 T-ENOLP0DO92 83 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 RPL22P35268 128 aaKnown RBP25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 TAF1BQ53T94 588 aaPredicted RBP25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 RIBC1Q8N443 379 aaPredicted RBP25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 UBR7Q8N806 425 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 RSRC1Q96IZ7 334 aaKnown RBP25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 PPP1R16BQ96T49 567 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 PAFAH2Q99487 392 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 PLCD4Q9BRC7 762 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 R3HDMLQ9H3Y0 253 aa25.62■■□□□ 1.69
SPTSSA-201ENST00000298130 PPP1R1BQ9UD71 204 aaPredicted RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms