RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 OLFM3Q96PB7 478 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 NMUR2Q9GZQ4 415 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 RANBP17Q9H2T7 1088 aaKnown RBP15.6■□□□□ 0.09
SPIDR-201ENST00000297423 EBF3Q9H4W6 596 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 TOPORSQ9NS56 1045 aaPredicted RBP15.6■□□□□ 0.09
SPIDR-201ENST00000297423 STAMBPO95630 424 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 ANPEPP15144 967 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 PHBP35232 272 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 ARL4CP56559 192 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 ZC3H12AQ5D1E8 599 aaKnown RBP15.6■□□□□ 0.09
SPIDR-201ENST00000297423 BSPRYQ5W0U4 402 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 DTNBP1Q96EV8 351 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 FAM210AQ96ND0 272 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 NT5C1BQ96P26 610 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 APOL6Q9BWW8 343 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 ZWILCHQ9H900 591 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 PSMC3IPQ9P2W1 217 aaPredicted RBP15.6■□□□□ 0.09
SPIDR-201ENST00000297423 PCDHA3Q9Y5H8 950 aa15.6■□□□□ 0.09
SPIDR-201ENST00000297423 NCANO14594 1321 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 EML1O00423 815 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 STAT2P52630 851 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 SLC45A4Q5BKX6 768 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 TCHHL1Q5QJ38 904 aaPredicted RBP15.59■□□□□ 0.09
SPIDR-201ENST00000297423 GSTCDQ8NEC7 633 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 C10orf82Q8WW14 230 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 CNBD2Q96M20 576 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 MECRQ9BV79 373 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 TDRKHQ9Y2W6 561 aaKnown RBP15.59■□□□□ 0.09
SPIDR-201ENST00000297423 AK5Q9Y6K8 562 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 TNNI1P19237 187 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 MAN1A1P33908 653 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 SLC25A3Q00325 362 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 PPP3CAQ08209 521 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 AP1B1Q10567 949 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 ZCCHC23Q6ZST2 131 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 KBTBD2Q8IY47 623 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.59■□□□□ 0.09
SPIDR-201ENST00000297423 GRIP2Q9C0E4 1043 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 PCDHA2Q9Y5H9 948 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 NOVP48745 357 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 LIN9Q5TKA1 542 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 GLIS1Q8NBF1 620 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 ZSWIM2Q8NEG5 633 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 UPF1Q92900 1129 aaKnown RBP eCLIP15.59■□□□□ 0.09
SPIDR-201ENST00000297423 TMEM109Q9BVC6 243 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 ATXN10Q9UBB4 475 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 DNPEPQ9ULA0 475 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 MAD1L1Q9Y6D9 718 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 ATRNL1Q5VV63 1379 aa15.59■□□□□ 0.09
SPIDR-201ENST00000297423 ANKRD33BA6NCL7 494 aa15.58■□□□□ 0.09
SPIDR-201ENST00000297423 COPEO14579 308 aa15.58■□□□□ 0.09
SPIDR-201ENST00000297423 HIF1AQ16665 826 aa15.58■□□□□ 0.09
SPIDR-201ENST00000297423 C11orf63Q6NUN7 778 aa15.58■□□□□ 0.09
SPIDR-201ENST00000297423 ZNF395Q9H8N7 513 aaPredicted RBP15.58■□□□□ 0.09
SPIDR-201ENST00000297423 GRID1Q9ULK0 1009 aa15.58■□□□□ 0.09
SPIDR-201ENST00000297423 SLC16A4O15374 487 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 SLC16A3O15427 465 aaKnown RBP15.58■□□□□ 0.08
SPIDR-201ENST00000297423 ZMPSTE24O75844 475 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 VAV1P15498 845 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 ECE1P42892 770 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 CAV1Q03135 178 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 FAM102BQ5T8I3 360 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 MARK2Q7KZI7 788 aaKnown RBP15.58■□□□□ 0.08
SPIDR-201ENST00000297423 ECSITQ9BQ95 431 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 SPATA16Q9BXB7 569 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 PPP1R11O60927 126 aaPredicted RBP15.58■□□□□ 0.08
SPIDR-201ENST00000297423 ANXA13P27216 316 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 MARSP56192 900 aaKnown RBP15.58■□□□□ 0.08
SPIDR-201ENST00000297423 PEX3P56589 373 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 PLEKHG4Q58EX7 1191 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 DCAF15Q66K64 600 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 NLGN2Q8NFZ4 835 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 ACER1Q8TDN7 264 aa15.58■□□□□ 0.08
SPIDR-201ENST00000297423 SCN9AQ15858 1988 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 MAP3K6O95382 1288 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 RPA1P27694 616 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 HIC1Q14526 733 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 SMTNL2Q2TAL5 461 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 GMCL1P1Q8NEA9 526 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 NAP1L4Q99733 375 aaKnown RBP15.57■□□□□ 0.08
SPIDR-201ENST00000297423 TUBB6Q9BUF5 446 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 XPO1O14980 1071 aaKnown RBP15.57■□□□□ 0.08
SPIDR-201ENST00000297423 TLR3O15455 904 aaKnown RBP15.57■□□□□ 0.08
SPIDR-201ENST00000297423 GAP43P17677 238 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 MTMR14Q8NCE2 650 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 ICA1LQ8NDH6 482 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 PAFAH2Q99487 392 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 HERPUD2Q9BSE4 406 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 KIFC3Q9BVG8 833 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 NELFEP18615 380 aaKnown RBP15.57■□□□□ 0.08
SPIDR-201ENST00000297423 MSX2P35548 267 aaPredicted RBP15.57■□□□□ 0.08
SPIDR-201ENST00000297423 AQP5P55064 265 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 WDR72Q3MJ13 1102 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 OXNAD1Q96HP4 312 aaPredicted RBP15.57■□□□□ 0.08
SPIDR-201ENST00000297423 GMCL1Q96IK5 515 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 ZNF341Q9BYN7 854 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 PPM1HQ9ULR3 514 aa15.57■□□□□ 0.08
SPIDR-201ENST00000297423 MYOCOSA0A1B0GUC4 107 aa15.56■□□□□ 0.08
SPIDR-201ENST00000297423 PEX1O43933 1283 aa15.56■□□□□ 0.08
SPIDR-201ENST00000297423 ZNF189O75820 626 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms