RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 LSP1P33241 339 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 GCLCP48506 637 aaPredicted RBP13.94□□□□□ -0.18
RUBCN-202ENST00000296343 HADHBP55084 474 aaKnown RBP13.94□□□□□ -0.18
RUBCN-202ENST00000296343 PLEKHA7Q6IQ23 1121 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 PNMA8AQ86V59 439 aaPredicted RBP13.94□□□□□ -0.18
RUBCN-202ENST00000296343 SLC4A11Q8NBS3 891 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 DCLK3Q9C098 648 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 CDC42EP4Q9H3Q1 356 aaKnown RBP13.94□□□□□ -0.18
RUBCN-202ENST00000296343 DPEP3Q9H4B8 488 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 NGRNQ9NPE2 291 aaKnown RBP13.94□□□□□ -0.18
RUBCN-202ENST00000296343 DIS3Q9Y2L1 958 aaKnown RBP13.94□□□□□ -0.18
RUBCN-202ENST00000296343 TMEM191CA6NGB0 347 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 MEIS3P2A8K0S8 358 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 E5RJQ4 531 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 IGF2BP3O00425 579 aaKnown RBP eCLIP13.94□□□□□ -0.18
RUBCN-202ENST00000296343 PPFIA4O75335 1185 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 MICAL2O94851 1124 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 CYP2C9P11712 490 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 ATXN1P54253 815 aaKnown RBP13.94□□□□□ -0.18
RUBCN-202ENST00000296343 PTPN11Q06124 597 aaPredicted RBP13.94□□□□□ -0.18
RUBCN-202ENST00000296343 FASTKD3Q14CZ7 662 aaKnown RBP13.94□□□□□ -0.18
RUBCN-202ENST00000296343 TAF1CQ15572 869 aaPredicted RBP13.94□□□□□ -0.18
RUBCN-202ENST00000296343 DGKDQ16760 1214 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 PAN2Q504Q3 1202 aaKnown RBP13.94□□□□□ -0.18
RUBCN-202ENST00000296343 PLEKHH3Q7Z736 793 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 ANKRD42Q8N9B4 389 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 CFAP57Q96MR6 1250 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 MRPL45Q9BRJ2 306 aaKnown RBP13.94□□□□□ -0.18
RUBCN-202ENST00000296343 CALCOCO1Q9P1Z2 691 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 ANAPC5Q9UJX4 755 aa13.94□□□□□ -0.18
RUBCN-202ENST00000296343 FSCN2O14926 492 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 EIF3HO15372 352 aaKnown RBP eCLIP13.93□□□□□ -0.18
RUBCN-202ENST00000296343 MTA2O94776 668 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 PROZP22891 400 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 GPS1Q13098 491 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 CST9Q5W186 159 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 NPNTQ6UXI9 565 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 ZNF677Q86XU0 584 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 ANKMY2Q8IV38 441 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 CLEC4CQ8WTT0 213 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 PABPC3Q9H361 631 aaKnown RBP13.93□□□□□ -0.18
RUBCN-202ENST00000296343 PCYOX1Q9UHG3 505 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 GJD2Q9UKL4 321 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 RGS16O15492 202 aaPredicted RBP13.93□□□□□ -0.18
RUBCN-202ENST00000296343 MYCP01106 439 aaPredicted RBP13.93□□□□□ -0.18
RUBCN-202ENST00000296343 ACAT1P24752 427 aaKnown RBP13.93□□□□□ -0.18
RUBCN-202ENST00000296343 AFF1P51825 1210 aaKnown RBP13.93□□□□□ -0.18
RUBCN-202ENST00000296343 PPP6R3Q5H9R7 873 aaPredicted RBP13.93□□□□□ -0.18
RUBCN-202ENST00000296343 PHF13Q86YI8 300 aaPredicted RBP13.93□□□□□ -0.18
RUBCN-202ENST00000296343 ARFGAP1Q8N6T3 406 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 ZFP42Q96MM3 310 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 ZIC5Q96T25 663 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 JPH2Q9BR39 696 aaPredicted RBP13.93□□□□□ -0.18
RUBCN-202ENST00000296343 GGT7Q9UJ14 662 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 TSPAN16Q9UKR8 245 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 TIMM13Q9Y5L4 95 aaPredicted RBP13.93□□□□□ -0.18
RUBCN-202ENST00000296343 SCINQ9Y6U3 715 aa13.93□□□□□ -0.18
RUBCN-202ENST00000296343 PODXLO00592 558 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 CST8O60676 142 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 GAS8O95995 478 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 PGK1P00558 417 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 C6orf222P0C671 652 aaPredicted RBP13.92□□□□□ -0.18
RUBCN-202ENST00000296343 ARSEP51690 589 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 GDF10P55107 478 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 IZUMO3Q5VZ72 239 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 SPRYD7Q5W111 196 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 TLK2Q86UE8 772 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 TMEM176AQ96HP8 235 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 KCNK9Q9NPC2 374 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 IP6K2Q9UHH9 426 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 FAM187AA6NFU0 413 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 TP73O15350 636 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 B4GALT4O60513 344 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 SMIM10L2AP0DMW4 78 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 SMIM10L2BP0DMW5 78 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 MYBL1P10243 752 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 LMO2P25791 158 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 ZNF132P52740 706 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 PPP1R26Q5T8A7 1209 aaPredicted RBP13.92□□□□□ -0.18
RUBCN-202ENST00000296343 CTU1Q7Z7A3 348 aaKnown RBP13.92□□□□□ -0.18
RUBCN-202ENST00000296343 MREGQ8N565 214 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 MSL3Q8N5Y2 521 aaKnown RBP13.92□□□□□ -0.18
RUBCN-202ENST00000296343 KCTD6Q8NC69 237 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 TRIM11Q96F44 468 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 THOC1Q96FV9 657 aaKnown RBP13.92□□□□□ -0.18
RUBCN-202ENST00000296343 PAIP2Q9BPZ3 127 aaKnown RBP13.92□□□□□ -0.18
RUBCN-202ENST00000296343 AVENQ9NQS1 362 aaPredicted RBP13.92□□□□□ -0.18
RUBCN-202ENST00000296343 PSD3Q9NYI0 1048 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 HEY1Q9Y5J3 304 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 TRIP11Q15643 1979 aa13.92□□□□□ -0.18
RUBCN-202ENST00000296343 LRCH4O75427 683 aa13.91□□□□□ -0.18
RUBCN-202ENST00000296343 CCDC130P13994 396 aa13.91□□□□□ -0.18
RUBCN-202ENST00000296343 TFE3P19532 575 aaPredicted RBP13.91□□□□□ -0.18
RUBCN-202ENST00000296343 CYP3A5P20815 502 aa13.91□□□□□ -0.18
RUBCN-202ENST00000296343 SLC26A2P50443 739 aa13.91□□□□□ -0.18
RUBCN-202ENST00000296343 C1QBPQ07021 282 aaKnown RBP13.91□□□□□ -0.18
RUBCN-202ENST00000296343 DUSP28Q4G0W2 176 aa13.91□□□□□ -0.18
RUBCN-202ENST00000296343 ZNF484Q5JVG2 852 aa13.91□□□□□ -0.18
RUBCN-202ENST00000296343 FAXCQ5TGI0 409 aa13.91□□□□□ -0.18
RUBCN-202ENST00000296343 C1orf228Q6PIY5 440 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms