RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 GAB3Q8WWW8 586 aa11.42□□□□□ -0.58
RFC4-201ENST00000296273 MRFAP1L1Q96HT8 127 aa11.42□□□□□ -0.58
RFC4-201ENST00000296273 GCNAQ96QF7 691 aa11.42□□□□□ -0.58
RFC4-201ENST00000296273 TMEM209Q96SK2 561 aa11.42□□□□□ -0.58
RFC4-201ENST00000296273 GTPBP4Q9BZE4 634 aaKnown RBP11.42□□□□□ -0.58
RFC4-201ENST00000296273 CRISPLD1Q9H336 500 aa11.42□□□□□ -0.58
RFC4-201ENST00000296273 TASP1Q9H6P5 420 aa11.42□□□□□ -0.58
RFC4-201ENST00000296273 LARSQ9P2J5 1176 aaKnown RBP11.42□□□□□ -0.58
RFC4-201ENST00000296273 PCDHGA5Q9Y5G8 931 aa11.42□□□□□ -0.58
RFC4-201ENST00000296273 AKAP3O75969 853 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 SMC2O95347 1197 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 PMLP29590 882 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 LONP1P36776 959 aaKnown RBP11.41□□□□□ -0.58
RFC4-201ENST00000296273 SHC2P98077 582 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 ATP2C1P98194 919 aaPredicted RBP11.41□□□□□ -0.58
RFC4-201ENST00000296273 AMPD2Q01433 879 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 SMARCB1Q12824 385 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 ITPRIPL2Q3MIP1 535 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 HYIQ5T013 277 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 CAMKK1Q8N5S9 505 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 SYT2Q8N9I0 419 aaPredicted RBP11.41□□□□□ -0.58
RFC4-201ENST00000296273 ATAD1Q8NBU5 361 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 C2orf15Q8WU43 125 aaKnown RBP11.41□□□□□ -0.58
RFC4-201ENST00000296273 BICD1Q96G01 975 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 ZFYVE19Q96K21 471 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 LRRC3BQ96PB8 259 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 ARRDC1-AS1Q9H2J1 176 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 SLC27A5Q9Y2P5 690 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 PCDHB6Q9Y5E3 794 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 NUP210Q8TEM1 1887 aaPredicted RBP11.41□□□□□ -0.58
RFC4-201ENST00000296273 CACNA1BQ00975 2339 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 PP2D1A8MPX8 630 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 TM4SF5O14894 197 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 AXIN1O15169 862 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 RPP40O75818 363 aaKnown RBP11.41□□□□□ -0.58
RFC4-201ENST00000296273 EPN2O95208 641 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 ADRB2P07550 413 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 TXLNAP40222 546 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 RAP1GAPP47736 663 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 LIG4P49917 911 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 LILRA4P59901 499 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 SPAG1Q07617 926 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 GRSF1Q12849 480 aaKnown RBP eCLIP11.41□□□□□ -0.58
RFC4-201ENST00000296273 TAF12Q16514 161 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 SPATA1Q5VX52 437 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 KCNK18Q7Z418 384 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 LUZP1Q86V48 1076 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 MLKLQ8NB16 471 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 TTC8Q8TAM2 541 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 EXOC4Q96A65 974 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 TRIM5Q9C035 493 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 RPF1Q9H9Y2 349 aaKnown RBP11.41□□□□□ -0.58
RFC4-201ENST00000296273 DSEQ9UL01 958 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 SLC8A2Q9UPR5 921 aa11.41□□□□□ -0.58
RFC4-201ENST00000296273 F5P12259 2224 aa11.4□□□□□ -0.58
RFC4-201ENST00000296273 ZFHX4Q86UP3 3567 aa11.4□□□□□ -0.58
RFC4-201ENST00000296273 SOBPA7XYQ1 873 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 LACTBL1A8MY62 500 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 HNRNPDLO14979 420 aaKnown RBP11.4□□□□□ -0.59
RFC4-201ENST00000296273 OGTO15294 1046 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 CYP11A1P05108 521 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 MYL1P05976 194 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 SLFN14P0C7P3 912 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 PRKCSHP14314 528 aaPredicted RBP11.4□□□□□ -0.59
RFC4-201ENST00000296273 DDX6P26196 483 aaKnown RBP eCLIP11.4□□□□□ -0.592e-7■□□□□ 9.4
RFC4-201ENST00000296273 CDC25AP30304 524 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 ABCD1P33897 745 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 TNFSF9P41273 254 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 ZNF75DP51815 510 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 NCKAP1LP55160 1127 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 TNK2Q07912 1038 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 RAD51AP2Q09MP3 1159 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 RUNX3Q13761 415 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 MGAT5BQ3V5L5 792 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 TMEM196Q5HYL7 178 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 CMTM8Q8IZV2 173 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 IQUBQ8NA54 791 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 SPPL2BQ8TCT7 592 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 ZC3H10Q96K80 434 aaKnown RBP11.4□□□□□ -0.59
RFC4-201ENST00000296273 SENP8Q96LD8 212 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 MMTAG2Q9BU76 263 aaKnown RBP11.4□□□□□ -0.59
RFC4-201ENST00000296273 HAPLN2Q9GZV7 340 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 KIF9Q9HAQ2 790 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 C2orf42Q9NWW7 574 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 ODF2LQ9ULJ1 636 aa11.4□□□□□ -0.59
RFC4-201ENST00000296273 TRDMT1O14717 391 aaKnown RBP11.39□□□□□ -0.59
RFC4-201ENST00000296273 EXTL3O43909 919 aa11.39□□□□□ -0.59
RFC4-201ENST00000296273 PRAMEF12O95522 483 aa11.39□□□□□ -0.59
RFC4-201ENST00000296273 PIGRP01833 764 aa11.39□□□□□ -0.59
RFC4-201ENST00000296273 AVPR1AP37288 418 aa11.39□□□□□ -0.59
RFC4-201ENST00000296273 SLC12A3P55017 1021 aa11.39□□□□□ -0.59
RFC4-201ENST00000296273 CYP4F8P98187 520 aa11.39□□□□□ -0.59
RFC4-201ENST00000296273 KARSQ15046 597 aaKnown RBP11.39□□□□□ -0.59
RFC4-201ENST00000296273 POSTNQ15063 836 aa11.39□□□□□ -0.59
RFC4-201ENST00000296273 SF3A2Q15428 464 aaKnown RBP11.39□□□□□ -0.59
RFC4-201ENST00000296273 ENOX2Q16206 610 aaKnown RBP11.39□□□□□ -0.59
RFC4-201ENST00000296273 IL17AQ16552 155 aa11.39□□□□□ -0.59
RFC4-201ENST00000296273 FBXO43Q4G163 708 aa11.39□□□□□ -0.59
RFC4-201ENST00000296273 PLA2G2CQ5R387 149 aa11.39□□□□□ -0.59
RFC4-201ENST00000296273 N4BP2L1Q5TBK1 243 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms