RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 CENPUQ71F23 418 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 ARFGAP1Q8N6T3 406 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 NIPA2Q8N8Q9 360 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 UTP4Q969X6 686 aaKnown RBP17.53■□□□□ 0.4
RPN1-201ENST00000296255 C12orf42Q96LP6 360 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 WRNIP1Q96S55 665 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 SMC6Q96SB8 1091 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 MAK16Q9BXY0 300 aaKnown RBP17.53■□□□□ 0.4
RPN1-201ENST00000296255 AS3MTQ9HBK9 375 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 DDX56Q9NY93 547 aaKnown RBP17.53■□□□□ 0.4
RPN1-201ENST00000296255 ZNF112Q9UJU3 913 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 SMG5Q9UPR3 1016 aaKnown RBP17.53■□□□□ 0.4
RPN1-201ENST00000296255 RPSAP08865 295 aaKnown RBP17.53■□□□□ 0.4
RPN1-201ENST00000296255 CDH5P33151 784 aaPredicted RBP17.53■□□□□ 0.4
RPN1-201ENST00000296255 EFTUD2Q15029 972 aaKnown RBP eCLIP17.53■□□□□ 0.45e-7■■■■□ 24.4
RPN1-201ENST00000296255 STXBP2Q15833 593 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 MSS51Q4VC12 460 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 CATSPERGQ6ZRH7 1159 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 ERICH1Q86X53 443 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 NIF3L1Q9GZT8 377 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 PICK1Q9NRD5 415 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 TJP2Q9UDY2 1190 aa17.53■□□□□ 0.4
RPN1-201ENST00000296255 MSCO60682 206 aa17.52■□□□□ 0.4
RPN1-201ENST00000296255 EDF1O60869 148 aaKnown RBP17.52■□□□□ 0.4
RPN1-201ENST00000296255 PIAS1O75925 651 aa17.52■□□□□ 0.4
RPN1-201ENST00000296255 CA4P22748 312 aa17.52■□□□□ 0.4
RPN1-201ENST00000296255 IL1R2P27930 398 aa17.52■□□□□ 0.4
RPN1-201ENST00000296255 RFC1P35251 1148 aaPredicted RBP17.52■□□□□ 0.4
RPN1-201ENST00000296255 YARSP54577 528 aaKnown RBP17.52■□□□□ 0.4
RPN1-201ENST00000296255 DYNLT1P63172 113 aa17.52■□□□□ 0.4
RPN1-201ENST00000296255 FNBP1LQ5T0N5 605 aa17.52■□□□□ 0.4
RPN1-201ENST00000296255 DENND1BQ6P3S1 775 aa17.52■□□□□ 0.4
RPN1-201ENST00000296255 ZPBP2Q6X784 338 aa17.52■□□□□ 0.4
RPN1-201ENST00000296255 SCARA5Q6ZMJ2 495 aa17.52■□□□□ 0.4
RPN1-201ENST00000296255 PRPF31Q8WWY3 499 aaKnown RBP17.52■□□□□ 0.4
RPN1-201ENST00000296255 WDR83Q9BRX9 315 aaKnown RBP17.52■□□□□ 0.4
RPN1-201ENST00000296255 ETNK1Q9HBU6 452 aa17.52■□□□□ 0.4
RPN1-201ENST00000296255 SLC24A2Q9UI40 661 aa17.52■□□□□ 0.4
RPN1-201ENST00000296255 RABGEF1Q9UJ41 708 aa17.52■□□□□ 0.4
RPN1-201ENST00000296255 SRCAPQ6ZRS2 3230 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 RFC5P40937 340 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 SLC25A11Q02978 314 aaKnown RBP17.52■□□□□ 0.39
RPN1-201ENST00000296255 TAP1Q03518 808 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 RASA2Q15283 850 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 SMTNL2Q2TAL5 461 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 EFHC2Q5JST6 749 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 KIAA0319LQ8IZA0 1049 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 ACTL9Q8TC94 416 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 NSMCE1Q8WV22 266 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 CPT1BQ92523 772 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 ERP27Q96DN0 273 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 ZNF518BQ9C0D4 1074 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 ZWILCHQ9H900 591 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 SENP1Q9P0U3 644 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 PSMC3IPQ9P2W1 217 aaPredicted RBP17.52■□□□□ 0.39
RPN1-201ENST00000296255 CYTH4Q9UIA0 394 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 PCDHGC3Q9UN70 934 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 C15orf41Q9Y2V0 281 aa17.52■□□□□ 0.39
RPN1-201ENST00000296255 A0A1B0GUA9 196 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 PEX10O60683 326 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 UBA1P22314 1058 aaKnown RBP17.51■□□□□ 0.39
RPN1-201ENST00000296255 EIF4BP23588 611 aaKnown RBP17.51■□□□□ 0.39
RPN1-201ENST00000296255 CCND1P24385 295 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 SSTR1P30872 391 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 ASPAP45381 313 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 CTCFP49711 727 aaPredicted RBP17.51■□□□□ 0.39
RPN1-201ENST00000296255 AP3M2P53677 418 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 OTUD4Q01804 1114 aaKnown RBP17.51■□□□□ 0.39
RPN1-201ENST00000296255 GRM1Q13255 1194 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 TFDP1Q14186 410 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 HIF1AQ16665 826 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 KCNT1Q5JUK3 1230 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 MICALL2Q8IY33 904 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 JOSD2Q8TAC2 188 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 FBF1Q8TES7 1133 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 JDP2Q8WYK2 163 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 CAMKK2Q96RR4 588 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 TCHPQ9BT92 498 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 SNCAIPQ9Y6H5 919 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 USH1CQ9Y6N9 552 aa17.51■□□□□ 0.39
RPN1-201ENST00000296255 SPDYE16A6NNV3 312 aaPredicted RBP17.5■□□□□ 0.39
RPN1-201ENST00000296255 TOM1L1O75674 476 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 SGSM1Q2NKQ1 1148 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 PTPN20Q4JDL3 420 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 POLNQ7Z5Q5 900 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 XYLT2Q9H1B5 865 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 ABLIM1O14639 778 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 LRCH4O75427 683 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 KRT4P19013 534 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 PSMA2P25787 234 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 GEMIN4P57678 1058 aaKnown RBP17.5■□□□□ 0.39
RPN1-201ENST00000296255 DUOXA2Q1HG44 320 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 DCAF15Q66K64 600 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 TAB3Q8N5C8 712 aaPredicted RBP17.5■□□□□ 0.39
RPN1-201ENST00000296255 NAT8LQ8N9F0 302 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 LRRC8CQ8TDW0 803 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 C10orf82Q8WW14 230 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 ACO2Q99798 780 aaKnown RBP17.5■□□□□ 0.39
RPN1-201ENST00000296255 TXLNGQ9NUQ3 528 aa17.5■□□□□ 0.39
RPN1-201ENST00000296255 ZMYND8Q9ULU4 1186 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms