RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 MYBPHLA2RUH7 354 aa28.71■■■□□ 2.19
SSU72-201ENST00000291386 LRG1P02750 347 aa28.71■■■□□ 2.19
SSU72-201ENST00000291386 WEE2P0C1S8 567 aa28.71■■■□□ 2.19
SSU72-201ENST00000291386 TUFMP49411 452 aaKnown RBP28.71■■■□□ 2.19
SSU72-201ENST00000291386 NCAPHQ15003 741 aa28.71■■■□□ 2.19
SSU72-201ENST00000291386 CFAP221Q4G0U5 840 aa28.71■■■□□ 2.19
SSU72-201ENST00000291386 TCP11X2Q5H9J9 407 aa28.71■■■□□ 2.19
SSU72-201ENST00000291386 TTC39CQ8N584 583 aa28.71■■■□□ 2.19
SSU72-201ENST00000291386 TATDN2Q93075 761 aa28.71■■■□□ 2.19
SSU72-201ENST00000291386 FUBP3Q96I24 572 aaKnown RBP eCLIP28.71■■■□□ 2.19
SSU72-201ENST00000291386 TUBGCP2Q9BSJ2 902 aa28.71■■■□□ 2.19
SSU72-201ENST00000291386 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.71■■■□□ 2.192e-6■■■■■ 173.4
SSU72-201ENST00000291386 PRKAG3Q9UGI9 489 aa28.71■■■□□ 2.19
SSU72-201ENST00000291386 YIPF1Q9Y548 306 aa28.71■■■□□ 2.19
SSU72-201ENST00000291386 GTPBP10A4D1E9 387 aaKnown RBP28.7■■■□□ 2.18
SSU72-201ENST00000291386 ATP2C2O75185 946 aa28.7■■■□□ 2.18
SSU72-201ENST00000291386 PTPN1P18031 435 aaKnown RBP28.7■■■□□ 2.18
SSU72-201ENST00000291386 PLD1Q13393 1074 aa28.7■■■□□ 2.18
SSU72-201ENST00000291386 MYCBPAPQ8TBZ2 947 aa28.7■■■□□ 2.18
SSU72-201ENST00000291386 FANCLQ9NW38 375 aa28.7■■■□□ 2.18
SSU72-201ENST00000291386 CDH22Q9UJ99 828 aa28.7■■■□□ 2.18
SSU72-201ENST00000291386 SLC27A5Q9Y2P5 690 aa28.7■■■□□ 2.18
SSU72-201ENST00000291386 TCF20Q9UGU0 1960 aaKnown RBP28.7■■■□□ 2.18
SSU72-201ENST00000291386 PTPRDP23468 1912 aa28.69■■■□□ 2.18
SSU72-201ENST00000291386 CCL16O15467 120 aa28.69■■■□□ 2.18
SSU72-201ENST00000291386 HAPLN1P10915 354 aaPredicted RBP28.69■■■□□ 2.18
SSU72-201ENST00000291386 PSMC1P62191 440 aaKnown RBP28.69■■■□□ 2.18
SSU72-201ENST00000291386 ZSCAN23Q3MJ62 389 aa28.69■■■□□ 2.18
SSU72-201ENST00000291386 MIIPQ5JXC2 388 aa28.69■■■□□ 2.18
SSU72-201ENST00000291386 C4orf50Q6ZRC1 276 aa28.69■■■□□ 2.18
SSU72-201ENST00000291386 CRYBG2Q8N1P7 616 aa28.69■■■□□ 2.18
SSU72-201ENST00000291386 TNIP3Q96KP6 325 aa28.69■■■□□ 2.18
SSU72-201ENST00000291386 PHF7Q9BWX1 381 aaPredicted RBP28.69■■■□□ 2.18
SSU72-201ENST00000291386 DPEP3Q9H4B8 488 aa28.69■■■□□ 2.18
SSU72-201ENST00000291386 PIDD1Q9HB75 910 aa28.69■■■□□ 2.18
SSU72-201ENST00000291386 WDR6Q9NNW5 1121 aaKnown RBP28.69■■■□□ 2.18
SSU72-201ENST00000291386 CILPO75339 1184 aa28.68■■■□□ 2.18
SSU72-201ENST00000291386 TBXAS1P24557 533 aaPredicted RBP28.68■■■□□ 2.18
SSU72-201ENST00000291386 NDST1P52848 882 aa28.68■■■□□ 2.18
SSU72-201ENST00000291386 TWF1Q12792 350 aa28.68■■■□□ 2.18
SSU72-201ENST00000291386 CUL2Q13617 745 aa28.68■■■□□ 2.18
SSU72-201ENST00000291386 VWA3BQ502W6 1294 aa28.68■■■□□ 2.18
SSU72-201ENST00000291386 HSP90AA4PQ58FG1 418 aa28.68■■■□□ 2.18
SSU72-201ENST00000291386 TTC9BQ8N6N2 239 aa28.68■■■□□ 2.18
SSU72-201ENST00000291386 B3GALNT2Q8NCR0 500 aa28.68■■■□□ 2.18
SSU72-201ENST00000291386 NT5C1BQ96P26 610 aa28.68■■■□□ 2.18
SSU72-201ENST00000291386 NDST4Q9H3R1 872 aa28.68■■■□□ 2.18
SSU72-201ENST00000291386 POMKQ9H5K3 350 aa28.68■■■□□ 2.18
SSU72-201ENST00000291386 ABI2Q9NYB9 513 aaPredicted RBP28.68■■■□□ 2.18
SSU72-201ENST00000291386 CCDC142Q17RM4 750 aa28.67■■■□□ 2.18
SSU72-201ENST00000291386 SPATA2LQ8IUW3 424 aaPredicted RBP28.67■■■□□ 2.18
SSU72-201ENST00000291386 WHAMMQ8TF30 809 aa28.67■■■□□ 2.18
SSU72-201ENST00000291386 MYLPFQ96A32 169 aa28.67■■■□□ 2.18
SSU72-201ENST00000291386 PCED1BQ96HM7 432 aa28.67■■■□□ 2.18
SSU72-201ENST00000291386 ASB3Q9Y575 518 aa28.67■■■□□ 2.18
SSU72-201ENST00000291386 UNC80Q8N2C7 3258 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 DOCK6Q96HP0 2047 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 NOTCH4Q99466 2003 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 ZNF18P17022 549 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 MAGEA11P43364 429 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 ALDH1A3P47895 512 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 ZNF165P49910 485 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 MGAT5BQ3V5L5 792 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 MDH1BQ5I0G3 518 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 GBP6Q6ZN66 633 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 ADHFE1Q8IWW8 467 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 AOPEPQ8N6M6 819 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 NT5C1AQ9BXI3 368 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 INTS2Q9H0H0 1204 aaKnown RBP28.66■■■□□ 2.18
SSU72-201ENST00000291386 HSD3B7Q9H2F3 369 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 AVENQ9NQS1 362 aaPredicted RBP28.66■■■□□ 2.18
SSU72-201ENST00000291386 CISHQ9NSE2 258 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 GCNT4Q9P109 453 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 CEP72Q9P209 647 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 DNMT3BQ9UBC3 853 aaKnown RBP28.66■■■□□ 2.18
SSU72-201ENST00000291386 HMGXB4Q9UGU5 601 aa28.66■■■□□ 2.18
SSU72-201ENST00000291386 SMTNL1A8MU46 457 aa28.65■■■□□ 2.18
SSU72-201ENST00000291386 CAVIN2O95810 425 aa28.65■■■□□ 2.18
SSU72-201ENST00000291386 PTPN2P17706 415 aa28.65■■■□□ 2.18
SSU72-201ENST00000291386 EPHB3P54753 998 aa28.65■■■□□ 2.18
SSU72-201ENST00000291386 YWHAEP62258 255 aaKnown RBP28.65■■■□□ 2.18
SSU72-201ENST00000291386 GCNT1Q02742 428 aa28.65■■■□□ 2.18
SSU72-201ENST00000291386 LRMPQ12912 555 aa28.65■■■□□ 2.18
SSU72-201ENST00000291386 VSTM1Q6UX27 236 aa28.65■■■□□ 2.18
SSU72-201ENST00000291386 GRASPQ7Z6J2 395 aaPredicted RBP28.65■■■□□ 2.18
SSU72-201ENST00000291386 DHX40Q8IX18 779 aaKnown RBP28.65■■■□□ 2.18
SSU72-201ENST00000291386 ELMOD1Q8N336 334 aa28.65■■■□□ 2.18
SSU72-201ENST00000291386 UBR7Q8N806 425 aa28.65■■■□□ 2.18
SSU72-201ENST00000291386 ZNF512Q96ME7 567 aaPredicted RBP28.65■■■□□ 2.18
SSU72-201ENST00000291386 TWNKQ96RR1 684 aa28.65■■■□□ 2.18
SSU72-201ENST00000291386 SEPT5Q99719 369 aaPredicted RBP28.65■■■□□ 2.18
SSU72-201ENST00000291386 ARID3AQ99856 593 aa28.65■■■□□ 2.18
SSU72-201ENST00000291386 DNAI2Q9GZS0 605 aa28.65■■■□□ 2.18
SSU72-201ENST00000291386 CLUHO75153 1309 aa28.65■■■□□ 2.18
SSU72-201ENST00000291386 CD58P19256 250 aa28.64■■■□□ 2.18
SSU72-201ENST00000291386 TRIM21P19474 475 aaKnown RBP28.64■■■□□ 2.18
SSU72-201ENST00000291386 CYP2F1P24903 491 aa28.64■■■□□ 2.18
SSU72-201ENST00000291386 KRT31Q15323 416 aa28.64■■■□□ 2.18
SSU72-201ENST00000291386 ACOT1Q86TX2 421 aa28.64■■■□□ 2.18
SSU72-201ENST00000291386 LIMA1Q9UHB6 759 aaKnown RBP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms