RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SH3D19Q5HYK7 790 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 THEMIS2Q5TEJ8 643 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 PPM1NQ8N819 430 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 TLK1Q9UKI8 766 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 CAPN6Q9Y6Q1 641 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 LAMB4A4D0S4 1761 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 A6NJR5 290 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 PIK3CDO00329 1044 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 INSRRP14616 1297 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 VAMP7P51809 220 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 ALDH18A1P54886 795 aaKnown RBP11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 DNAL1Q4LDG9 190 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 SPOPLQ6IQ16 392 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 JAMLQ86YT9 394 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 DCP1BQ8IZD4 617 aaKnown RBP11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 APPL2Q8NEU8 664 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 SMG5Q9UPR3 1016 aaKnown RBP11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 TRPV2Q9Y5S1 764 aa11.91□□□□□ -0.5
NPC1L1-201ENST00000289547 FTLP02792 175 aaPredicted RBP11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 FGRP09769 529 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 KLK7P49862 253 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 KYNUQ16719 465 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 DNAJC24Q6P3W2 148 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 NUDT18Q6ZVK8 323 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 SH3BP5LQ7L8J4 393 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 VSIG10LQ86VR7 867 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 ERP44Q9BS26 406 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 FAM129AQ9BZQ8 928 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 SLC13A1Q9BZW2 595 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 ADA2Q9NZK5 511 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 NRCAMQ92823 1304 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 PDXKO00764 312 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 FARP2O94887 1054 aaPredicted RBP11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 CYP3A4P08684 503 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 SLC10A3P09131 477 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 ELNP15502 786 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 TRPC1P48995 793 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 SV2CQ496J9 727 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 CEP19Q96LK0 163 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 TSSK1BQ9BXA7 367 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 MRPL9Q9BYD2 267 aaKnown RBP11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 COL18A1P39060 1754 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 H7C4K7 107 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 SEC24DO94855 1032 aaPredicted RBP11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 NPTXRO95502 500 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 PRAMEP78395 509 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 BEX3Q00994 111 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 KRT39Q6A163 491 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 DEPDC1BQ8WUY9 529 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 HPS3Q969F9 1004 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 CCDC90BQ9GZT6 254 aa11.9□□□□□ -0.5
NPC1L1-201ENST00000289547 FAM205CA6NFA0 338 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 E7ENQ6 273 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 LGALS2P05162 132 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 PNPLA4P41247 253 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 GPS1Q13098 491 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 DRAP1Q14919 205 aaPredicted RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 ZNF410Q86VK4 478 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 CATSPER3Q86XQ3 398 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 CATSPER1Q8NEC5 780 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 RNF25Q96BH1 459 aaPredicted RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 FAM217BQ9NTX9 383 aaPredicted RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 NDUFA13Q9P0J0 144 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 SNX5Q9Y5X3 404 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 TJP3O95049 919 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 PGK1P00558 417 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 PLEKP08567 350 aaPredicted RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 MAP4P27816 1152 aaKnown RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 SKOR1P84550 965 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 ZNF564Q8TBZ8 553 aaPredicted RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 CCT7Q99832 543 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 REEP2Q9BRK0 252 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 ROPN1BQ9BZX4 212 aaPredicted RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 FAM96AQ9H5X1 160 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 ROPN1Q9HAT0 212 aaPredicted RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 H3BRJ5 948 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 XPO1O14980 1071 aaKnown RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 EFCAB14O75071 495 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 ATP9AO75110 1047 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 DAB1O75553 588 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 GLI1P08151 1106 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 PYGBP11216 843 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 AXLP30530 894 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 CLCN3P51790 818 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 NPEPPSP55786 919 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 ARL13BQ3SXY8 428 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 SPATA2LQ8IUW3 424 aaPredicted RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 HDAC7Q8WUI4 952 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 CAVIN3Q969G5 261 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 NSL1Q96IY1 281 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 FAM210AQ96ND0 272 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 OLFML3Q9NRN5 406 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 EIF3DO15371 548 aaKnown RBP eCLIP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 SLC37A4O43826 429 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 PARNO95453 639 aaKnown RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 ELF3P78545 371 aaPredicted RBP11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 OCRLQ01968 901 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 PRAMEF19Q5SWL8 479 aa11.89□□□□□ -0.51
NPC1L1-201ENST00000289547 GJC2Q5T442 439 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms