RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 NTHL1P78549 312 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 FKBP3Q00688 224 aaKnown RBP9.83□□□□□ -0.84
HMGN1-201ENST00000288344 ADCY1Q08828 1119 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 DUSP4Q13115 394 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 CCDC142Q17RM4 750 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 SLC5A9Q2M3M2 681 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 ISM2Q6H9L7 571 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 TMC8Q8IU68 726 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 IRF2BP1Q8IU81 584 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 TMEM86AQ8N2M4 240 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 ITFG1Q8TB96 612 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 SMG7Q92540 1137 aaKnown RBP9.83□□□□□ -0.84
HMGN1-201ENST00000288344 EEF2KMTQ96G04 330 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 ANKRD36BP1Q96IX9 119 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 RPGRIP1Q96KN7 1286 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 ZNF560Q96MR9 790 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 CLSTN2Q9H4D0 955 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 APOBEC3GQ9HC16 384 aaKnown RBP9.83□□□□□ -0.84
HMGN1-201ENST00000288344 HCFC1R1Q9NWW0 138 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 INSL5Q9Y5Q6 135 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 SNX9Q9Y5X1 595 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 GREB1Q4ZG55 1949 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 DMDP11532 3685 aa9.83□□□□□ -0.84
HMGN1-201ENST00000288344 MYBPHLA2RUH7 354 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 CCL16O15467 120 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 KINO60870 393 aaKnown RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 ATP2C2O75185 946 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 TNNC2P02585 160 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 CFHP08603 1231 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 TMEM191BP0C7N4 346 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 LAMP2P13473 410 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 HMGA1P17096 107 aaKnown RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 ATF6P18850 670 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 RPL13P26373 211 aaKnown RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 GTF2H1P32780 548 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 MARSP56192 900 aaKnown RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 LRRC63Q05C16 580 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 SMARCB1Q12824 385 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 BFSP1Q12934 665 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 PPM1LQ5SGD2 360 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 CCDC149Q6ZUS6 474 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 PAQR9Q6ZVX9 377 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 INTS8Q75QN2 995 aaKnown RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 GRASPQ7Z6J2 395 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 FILIP1Q7Z7B0 1213 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 TRIML1Q8N9V2 468 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 LMO3Q8TAP4 145 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 SEMA4DQ92854 862 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 CCDC47Q96A33 483 aaKnown RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 ELMO3Q96BJ8 720 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 CCDC34Q96HJ3 373 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 FNBP1Q96RU3 617 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 MRPL45Q9BRJ2 306 aaKnown RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 IL21Q9HBE4 155 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 CRTAC1Q9NQ79 661 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 TMEM30AQ9NV96 361 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 SLC27A5Q9Y2P5 690 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 CLUHO75153 1309 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 DENND4CQ5VZ89 1909 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 ZDBF2Q9HCK1 2354 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 VPS13AQ96RL7 3174 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 GPR37L1O60883 481 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 HAPLN1P10915 354 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 LHX1P48742 406 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 CDH8P55286 799 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 NCOA4Q13772 614 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 CAMK4Q16566 473 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 SGSM1Q2NKQ1 1148 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 WDR72Q3MJ13 1102 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 CFAP221Q4G0U5 840 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 INTS6LQ5JSJ4 861 aaKnown RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 ZNF318Q5VUA4 2279 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 CEP135Q66GS9 1140 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 USP37Q86T82 979 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 TMEM150AQ86TG1 271 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 FAM186BQ8IYM0 893 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 CRYBG2Q8N1P7 616 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 TAS1R2Q8TE23 839 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 WHAMMQ8TF30 809 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 C2orf15Q8WU43 125 aaKnown RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 EDAQ92838 391 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 SLC35C1Q96A29 364 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 ASIC4Q96FT7 647 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 FAXDC2Q96IV6 333 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 PGLYRP2Q96PD5 576 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 RPP25Q9BUL9 199 aaKnown RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 BCO2Q9BYV7 579 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 CYP4F11Q9HBI6 524 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 DDX43Q9NXZ2 648 aaKnown RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 MUTYHQ9UIF7 546 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 HOOK1Q9UJC3 728 aaKnown RBP9.82□□□□□ -0.84
HMGN1-201ENST00000288344 POLIQ9UNA4 740 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 FRMD4BQ9Y2L6 1034 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 YIPF1Q9Y548 306 aa9.82□□□□□ -0.84
HMGN1-201ENST00000288344 MYO15AQ9UKN7 3530 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 CFAP99D6REC4 459 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 BIN1O00499 593 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 CETN3O15182 167 aa9.81□□□□□ -0.84
HMGN1-201ENST00000288344 SLC16A3O15427 465 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms