RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 GRAMD1BQ3KR37 738 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 EMC1Q8N766 993 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 MAB21L3Q8N8X9 362 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 HELQQ8TDG4 1101 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 TARS2Q9BW92 718 aaKnown RBP14.05□□□□□ -0.16
SCAF4-201ENST00000286835 CORO1CQ9ULV4 474 aaPredicted RBP14.05□□□□□ -0.16
SCAF4-201ENST00000286835 FZD1Q9UP38 647 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 ITGB4P16144 1822 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 SPECC1L-ADORA2AF8WAN1 911 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 CFHP08603 1231 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 EIF3EP60228 445 aaKnown RBP14.05□□□□□ -0.16
SCAF4-201ENST00000286835 DSTYKQ6XUX3 929 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 ENOSF1Q7L5Y1 443 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 SH3BP5LQ7L8J4 393 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 APOBEC3FQ8IUX4 373 aaKnown RBP14.05□□□□□ -0.16
SCAF4-201ENST00000286835 AGR3Q8TD06 166 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 SLC26A7Q8TE54 656 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 ZBTB45Q96K62 511 aaPredicted RBP14.05□□□□□ -0.16
SCAF4-201ENST00000286835 ANGPTL2Q9UKU9 493 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 C2CD2Q9Y426 696 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 COL14A1Q05707 1796 aaKnown RBP14.05□□□□□ -0.16
SCAF4-201ENST00000286835 hCG_2014768A0A024R1R8 64 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 DKC1O60832 514 aaKnown RBP eCLIP14.05□□□□□ -0.16
SCAF4-201ENST00000286835 JAG1P78504 1218 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 DPP9Q86TI2 863 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 CDR2LQ86X02 465 aaPredicted RBP14.05□□□□□ -0.16
SCAF4-201ENST00000286835 NUDCD3Q8IVD9 361 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 GMCL1P1Q8NEA9 526 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 AGBL3Q8NEM8 1001 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 PSPC1Q8WXF1 523 aaKnown RBP14.05□□□□□ -0.16
SCAF4-201ENST00000286835 PPP1R16BQ96T49 567 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 RANBP17Q9H2T7 1088 aaKnown RBP14.05□□□□□ -0.16
SCAF4-201ENST00000286835 ARL8BQ9NVJ2 186 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 NDE1Q9NXR1 346 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 MROH7Q68CQ1 1323 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 PSTPIP1O43586 416 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 SMNDC1O75940 238 aaKnown RBP eCLIP14.04□□□□□ -0.16
SCAF4-201ENST00000286835 VIL1P09327 827 aaKnown RBP14.04□□□□□ -0.16
SCAF4-201ENST00000286835 TPBGLP0DKB5 382 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 PSMC1P62191 440 aaKnown RBP14.04□□□□□ -0.16
SCAF4-201ENST00000286835 RPS6P62753 249 aaKnown RBP14.04□□□□□ -0.16
SCAF4-201ENST00000286835 EXD1Q8NHP7 514 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 LRMDAQ9H2I8 198 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 FEM1BQ9UK73 627 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 ADGRA3Q8IWK6 1321 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 RBP3P10745 1247 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 TCF4P15884 667 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 NCOA4Q13772 614 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 PPP6R3Q5H9R7 873 aaPredicted RBP14.04□□□□□ -0.16
SCAF4-201ENST00000286835 GPAT2Q6NUI2 795 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 SPOCD1Q6ZMY3 1216 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 C15orf52Q6ZUT6 534 aaKnown RBP14.04□□□□□ -0.16
SCAF4-201ENST00000286835 LRRN4Q8WUT4 740 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 UCMAQ8WVF2 138 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 SLC7A3Q8WY07 619 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 NMRK1Q9NWW6 199 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 TRIM49D1C9J1S8 452 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 GRAP2O75791 330 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 ZBTB48P10074 688 aaPredicted RBP14.04□□□□□ -0.16
SCAF4-201ENST00000286835 POLR2BP30876 1174 aaKnown RBP14.04□□□□□ -0.16
SCAF4-201ENST00000286835 CACNA2D1P54289 1103 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 CUL2Q13617 745 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 BMPR2Q13873 1038 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 CRLF3Q8IUI8 442 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 SIAH1Q8IUQ4 282 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 DDX27Q96GQ7 796 aaKnown RBP14.04□□□□□ -0.16
SCAF4-201ENST00000286835 ELP3Q9H9T3 547 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 IFT122Q9HBG6 1241 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 RAB6BQ9NRW1 208 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 NENFQ9UMX5 172 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 PCDHA10Q9Y5I2 948 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 FAM237BA0A1B0GVD1 139 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 PEX11AO75192 247 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 DDNO94850 711 aaPredicted RBP14.04□□□□□ -0.16
SCAF4-201ENST00000286835 DSG3P32926 999 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 MAMLD1Q13495 774 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 MAPK6Q16659 721 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 GALNTL6Q49A17 601 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.04□□□□□ -0.16
SCAF4-201ENST00000286835 TUBB6Q9BUF5 446 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 NGRNQ9NPE2 291 aaKnown RBP14.04□□□□□ -0.16
SCAF4-201ENST00000286835 PCMTD2Q9NV79 361 aa14.04□□□□□ -0.16
SCAF4-201ENST00000286835 LOC100653049A0A140TA62 436 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 WNT10BO00744 389 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 KRT34O76011 436 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 ASMTLO95671 621 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 APRTP07741 180 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 DESP17661 470 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 ATP6V1C1P21283 382 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 TGFB2P61812 414 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 DGKZQ13574 1117 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 RASA2Q15283 850 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 SIX1Q15475 284 aaPredicted RBP14.03□□□□□ -0.16
SCAF4-201ENST00000286835 NBPF12Q5TAG4 269 aaPredicted RBP14.03□□□□□ -0.16
SCAF4-201ENST00000286835 LRRC74BQ6ZQY2 392 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 CLNKQ7Z7G1 428 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 PRPF39Q86UA1 669 aaKnown RBP14.03□□□□□ -0.16
SCAF4-201ENST00000286835 CD101Q93033 1021 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 BTBD10Q9BSF8 475 aa14.03□□□□□ -0.16
SCAF4-201ENST00000286835 APOL6Q9BWW8 343 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms