RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 IFT43Q96FT9 208 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 KIFC3Q9BVG8 833 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 SEL1LQ9UBV2 794 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 ABT1Q9ULW3 272 aaKnown RBP11.95□□□□□ -0.5
SCLT1-201ENST00000281142 PRPF4O43172 522 aaKnown RBP eCLIP11.95□□□□□ -0.5
SCLT1-201ENST00000281142 TYROBPO43914 113 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 ZBED4O75132 1171 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 COQ9O75208 318 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 KRT4P19013 534 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 VHLP40337 213 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 CPA2P48052 419 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 CAV1Q03135 178 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 CLEC16AQ2KHT3 1053 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 TREML2Q5T2D2 321 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 RINLQ6ZS11 566 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 PASD1Q8IV76 773 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 ZCCHC9Q8N567 271 aaKnown RBP11.95□□□□□ -0.5
SCLT1-201ENST00000281142 XXYLT1Q8NBI6 393 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 POMGNT1Q8WZA1 660 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 LPAR1Q92633 364 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 ACSF2Q96CM8 615 aaPredicted RBP11.95□□□□□ -0.5
SCLT1-201ENST00000281142 C12orf42Q96LP6 360 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 NACC1Q96RE7 527 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 UBE2OQ9C0C9 1292 aaKnown RBP11.95□□□□□ -0.5
SCLT1-201ENST00000281142 C10orf88Q9H8K7 445 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 SLC17A7Q9P2U7 560 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 DNPEPQ9ULA0 475 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 UBE4BO95155 1302 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 TRAFD1O14545 582 aaPredicted RBP11.95□□□□□ -0.5
SCLT1-201ENST00000281142 FOSP01100 380 aaPredicted RBP11.95□□□□□ -0.5
SCLT1-201ENST00000281142 UBTFL6P0CB48 400 aaPredicted RBP11.95□□□□□ -0.5
SCLT1-201ENST00000281142 ZNF157P51786 506 aaPredicted RBP11.95□□□□□ -0.5
SCLT1-201ENST00000281142 NEK3P51956 506 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 NR1H3Q13133 447 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 SPRYD7Q5W111 196 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 SYDE1Q6ZW31 735 aaPredicted RBP11.95□□□□□ -0.5
SCLT1-201ENST00000281142 LRRC6Q86X45 466 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 RASAL3Q86YV0 1011 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 ZBED8Q8IZ13 594 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 KIFAP3Q92845 792 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 PLVAPQ9BX97 442 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 OSBPL8Q9BZF1 889 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 RPAP3Q9H6T3 665 aaPredicted RBP11.95□□□□□ -0.5
SCLT1-201ENST00000281142 TLE6Q9H808 572 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 FBXO28Q9NVF7 368 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 HEY2Q9UBP5 337 aa11.95□□□□□ -0.5
SCLT1-201ENST00000281142 UMODL1Q5DID0 1318 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 CXCL11O14625 94 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 WDR46O15213 610 aaKnown RBP11.94□□□□□ -0.5
SCLT1-201ENST00000281142 SLC16A4O15374 487 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 FAM163BP0C2L3 166 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 MFAP3P55082 362 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 PPP2R5CQ13362 524 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 RGMBQ6NW40 437 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 MCOLN2Q8IZK6 566 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 CCDC89Q8N998 374 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 STOML1Q9UBI4 398 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 COL11A1P12107 1806 aaPredicted RBP11.94□□□□□ -0.5
SCLT1-201ENST00000281142 C2CD2LO14523 706 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 GSC2O15499 205 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 CACNA2D1P54289 1103 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 SLC45A4Q5BKX6 768 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 CMPK2Q5EBM0 449 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 IRGCQ6NXR0 463 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 CCDC174Q6PII3 467 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 LRRC74BQ6ZQY2 392 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 GADL1Q6ZQY3 521 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 RGS9BPQ6ZS82 235 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 APLFQ8IW19 511 aaPredicted RBP11.94□□□□□ -0.5
SCLT1-201ENST00000281142 CFAP57Q96MR6 1250 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 OCEL1Q9H607 264 aa11.94□□□□□ -0.5
SCLT1-201ENST00000281142 PIK3CDO00329 1044 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 AMPD1P23109 780 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 SERPINB3P29508 390 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 RASSF2P50749 326 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 GPS1Q13098 491 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 LRRC23Q53EV4 343 aaPredicted RBP11.93□□□□□ -0.5
SCLT1-201ENST00000281142 ZNF513Q8N8E2 541 aaPredicted RBP11.93□□□□□ -0.5
SCLT1-201ENST00000281142 FBXO27Q8NI29 283 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 PTCD3Q96EY7 689 aaKnown RBP11.93□□□□□ -0.5
SCLT1-201ENST00000281142 ZNF577Q9BSK1 485 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 KRT82Q9NSB4 513 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 ARMCX1Q9P291 453 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 LRCH1Q9Y2L9 728 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 FAM155AB1AL88 458 aaPredicted RBP11.93□□□□□ -0.5
SCLT1-201ENST00000281142 PSMG1O95456 288 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 ZCCHC18P0CG32 403 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 SSTR1P30872 391 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 MAN1A1P33908 653 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 ARSEP51690 589 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 APLP1P51693 650 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 STAT2P52630 851 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 SNAPC2Q13487 334 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 CCNG2Q16589 344 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 LMBRD2Q68DH5 695 aaPredicted RBP11.93□□□□□ -0.5
SCLT1-201ENST00000281142 ZNF276Q8N554 614 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 C11orf70Q9BRQ4 267 aa11.93□□□□□ -0.5
SCLT1-201ENST00000281142 BTBD10Q9BSF8 475 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms