RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 WDCPQ9H6R7 721 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 ETNK1Q9HBU6 452 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 RIC1Q4ADV7 1423 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 ZNF197O14709 1029 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 MAP3K7O43318 606 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 FNTAP49354 379 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 TWF1Q12792 350 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 KCNT1Q5JUK3 1230 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 KCNK18Q7Z418 384 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 CNPY4Q8N129 248 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 SH3KBP1Q96B97 665 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 CCDC138Q96M89 665 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 CYP3A43Q9HB55 503 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 VTA1Q9NP79 307 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 TCP11X1B4DZS4 312 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 ZBTB39O15060 712 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 NDUFS3O75489 264 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 SLURP2P0DP57 97 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 HADHAP40939 763 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 SERPINB9P50453 376 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 VGLL4Q14135 290 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 TAF11Q15544 211 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 GRIK4Q16099 956 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 COBLL1Q53SF7 1204 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 LRIG3Q6UXM1 1119 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 TRAPPC12Q8WVT3 735 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 RRAGCQ9HB90 399 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 PCDHAC2Q9Y5I4 1007 aa11.78□□□□□ -0.52
USP6NL-201ENST00000277575 TMEM247A6NEH6 219 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 KPNA6O60684 536 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 POLBP06746 335 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 PTGER2P43116 358 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 BCAT1P54687 386 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 MAPK7Q13164 816 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 BFSP2Q13515 415 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 LBRQ14739 615 aaKnown RBP11.77□□□□□ -0.52
USP6NL-201ENST00000277575 SZRD1Q7Z422 152 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 SLC47A2Q86VL8 602 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 MIB1Q86YT6 1006 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 SLC20A1Q8WUM9 679 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 NCLNQ969V3 563 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 SLC35C1Q96A29 364 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 WWP1Q9H0M0 922 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 RANBP17Q9H2T7 1088 aaKnown RBP11.77□□□□□ -0.52
USP6NL-201ENST00000277575 PPCSQ9HAB8 311 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 ARHGEF38Q9NXL2 777 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 GPRC5DQ9NZD1 345 aa11.77□□□□□ -0.52
USP6NL-201ENST00000277575 FRMPD4Q14CM0 1322 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 PSTPIP1O43586 416 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 ADCY3O60266 1144 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 CCDC22O60826 627 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 MAP3K6O95382 1288 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 ANP32DO95626 131 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 CYP3A4P08684 503 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 SLC2A3P11169 496 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 MDH1P40925 334 aaKnown RBP11.77□□□□□ -0.53
USP6NL-201ENST00000277575 HSP90AA5PQ58FG0 334 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 FBXO47Q5MNV8 452 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 NT5DC1Q5TFE4 455 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 TDRD10Q5VZ19 366 aaKnown RBP11.77□□□□□ -0.53
USP6NL-201ENST00000277575 DDX53Q86TM3 631 aaKnown RBP11.77□□□□□ -0.53
USP6NL-201ENST00000277575 VSIG10LQ86VR7 867 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 ADGRF2Q8IZF7 708 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 TATDN2Q93075 761 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 STARD7Q9NQZ5 370 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 TLR2O60603 784 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 F9P00740 461 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 SPRP35270 261 aaPredicted RBP11.77□□□□□ -0.53
USP6NL-201ENST00000277575 ERVK-9P63128 1117 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 C4orf22Q6V702 233 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 LCA5Q86VQ0 697 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 DDIASQ8IXT1 998 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 ARHGAP18Q8N392 663 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 PBXIP1Q96AQ6 731 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 SGSM3Q96HU1 749 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 RPRD1AQ96P16 312 aaPredicted RBP11.77□□□□□ -0.53
USP6NL-201ENST00000277575 MTMR9Q96QG7 549 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 DUSP9Q99956 384 aaKnown RBP11.77□□□□□ -0.53
USP6NL-201ENST00000277575 OSGEPQ9NPF4 335 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 KRT82Q9NSB4 513 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 USP20Q9Y2K6 914 aa11.77□□□□□ -0.53
USP6NL-201ENST00000277575 PPFIA2O75334 1257 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 ATN1P54259 1190 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 FOXD4Q12950 439 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 LAMB3Q13751 1172 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 SLC29A2Q14542 456 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 C1orf146Q5VVC0 180 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 NAPEPLDQ6IQ20 393 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 ZPBP2Q6X784 338 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 PPIL6Q8IXY8 311 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 SLC25A41Q8N5S1 370 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 DNAJB3Q8WWF6 145 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 ATG4AQ8WYN0 398 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 ZNF669Q96BR6 464 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 PPP1R2P1Q96PQ5 205 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 KLF6Q99612 283 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 LATS2Q9NRM7 1088 aa11.76□□□□□ -0.53
USP6NL-201ENST00000277575 C20orf96Q9NUD7 363 aaPredicted RBP11.76□□□□□ -0.53
USP6NL-201ENST00000277575 INTS13Q9NVM9 706 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms