RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 NR3C2P08235 984 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 KRT16P08779 473 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 TFE3P19532 575 aaPredicted RBP20.28■□□□□ 0.84
FAM20B-201ENST00000263733 IREB2P48200 963 aaKnown RBP20.28■□□□□ 0.84
FAM20B-201ENST00000263733 SKOR1P84550 965 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 AGBL1Q96MI9 1066 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 CHCHD3Q9NX63 227 aaKnown RBP20.28■□□□□ 0.84
FAM20B-201ENST00000263733 DNAJC16Q9Y2G8 782 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 CUL2Q13617 745 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 LAMB3Q13751 1172 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 CNPY4Q8N129 248 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 SCAF8Q9UPN6 1271 aaKnown RBP20.28■□□□□ 0.84
FAM20B-201ENST00000263733 TRAPPC3O43617 180 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 CBX6O95503 412 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 ZNF235Q14590 738 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 NIF3L1Q9GZT8 377 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 A0A0A6YYK5 440 aaPredicted RBP20.28■□□□□ 0.84
FAM20B-201ENST00000263733 ABCE1P61221 599 aaKnown RBP20.28■□□□□ 0.84
FAM20B-201ENST00000263733 RBP5P82980 135 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 SPDYAQ5MJ70 313 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 PCNX4Q63HM2 1172 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 SP8Q8IXZ3 490 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 TAGAPQ8N103 731 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 MOV10L1Q9BXT6 1211 aaKnown RBP20.28■□□□□ 0.84
FAM20B-201ENST00000263733 TBC1D4O60343 1298 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 FSBPO95073 299 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 BMP6P22004 513 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 AVPR1AP37288 418 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 VCPP55072 806 aaKnown RBP20.28■□□□□ 0.84
FAM20B-201ENST00000263733 BMPR2Q13873 1038 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 UGP2Q16851 508 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 LRRC71Q8N4P6 559 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 IPMKQ8NFU5 416 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 VPS50Q96JG6 964 aa20.28■□□□□ 0.84
FAM20B-201ENST00000263733 HMOX2P30519 316 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 TMEM132DQ14C87 1099 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 TNIP3Q96KP6 325 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 ADGRA2Q96PE1 1338 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 M0R3G1 203 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 SMAPO00193 183 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 PDE5AO76074 875 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 MLH1P40692 756 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 PRPF18Q99633 342 aaKnown RBP20.27■□□□□ 0.84
FAM20B-201ENST00000263733 PSMC6P62333 389 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 ELF3P78545 371 aaPredicted RBP20.27■□□□□ 0.84
FAM20B-201ENST00000263733 SNX30Q5VWJ9 437 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.27■□□□□ 0.84
FAM20B-201ENST00000263733 KRT8P05787 483 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 TRIM60Q495X7 471 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 SEPT12Q8IYM1 358 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 KCND1Q9NSA2 647 aa20.27■□□□□ 0.84
FAM20B-201ENST00000263733 ERCC6L2Q5T890 1561 aa20.27■□□□□ 0.83
FAM20B-201ENST00000263733 DCAF6Q58WW2 860 aa20.27■□□□□ 0.83
FAM20B-201ENST00000263733 PIK3R5Q8WYR1 880 aa20.27■□□□□ 0.83
FAM20B-201ENST00000263733 RIT2Q99578 217 aa20.27■□□□□ 0.83
FAM20B-201ENST00000263733 SNX13Q9Y5W8 968 aa20.27■□□□□ 0.83
FAM20B-201ENST00000263733 CEP152O94986 1710 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 E9PBE3 544 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 KLHL41O60662 606 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 CCDC159P0C7I6 412 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 PYGMP11217 842 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 TBCCQ15814 346 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 DENND5BQ6ZUT9 1274 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 HSPA1AP0DMV8 641 aaKnown RBP20.26■□□□□ 0.83
FAM20B-201ENST00000263733 HSPA1BP0DMV9 641 aaKnown RBP20.26■□□□□ 0.83
FAM20B-201ENST00000263733 TFDP3Q5H9I0 405 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 TEKT2Q9UIF3 430 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 SALL1Q9NSC2 1324 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 TNS3Q68CZ2 1445 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 PABPC5Q96DU9 382 aaKnown RBP20.26■□□□□ 0.83
FAM20B-201ENST00000263733 ILKAPQ9H0C8 392 aaPredicted RBP20.26■□□□□ 0.83
FAM20B-201ENST00000263733 IGSF9BQ9UPX0 1349 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 SLC30A10Q6XR72 485 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 TAGLN3Q9UI15 199 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 RPS6KL1Q9Y6S9 549 aa20.26■□□□□ 0.83
FAM20B-201ENST00000263733 DCAF4L1Q3SXM0 396 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 TAS1R2Q8TE23 839 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 MYLK2Q9H1R3 596 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 ATP11BQ9Y2G3 1177 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 DLC1Q96QB1 1528 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 NT5C1AQ9BXI3 368 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 GPATCH2LQ9NWQ4 482 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 PTPRUQ92729 1446 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 SNUPNO95149 360 aaKnown RBP20.25■□□□□ 0.83
FAM20B-201ENST00000263733 CLPTM1O96005 669 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 PTGER2P43116 358 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 GLRBP48167 497 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 ISLR2Q6UXK2 745 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 SETD3Q86TU7 594 aaPredicted RBP20.25■□□□□ 0.83
FAM20B-201ENST00000263733 ATPAF2Q8N5M1 289 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 ZSWIM2Q8NEG5 633 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 CNOT7Q9UIV1 285 aaKnown RBP20.25■□□□□ 0.83
FAM20B-201ENST00000263733 STIP1P31948 543 aaKnown RBP20.25■□□□□ 0.83
FAM20B-201ENST00000263733 PLIN5Q00G26 463 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 OASLQ15646 514 aaKnown RBP20.25■□□□□ 0.83
FAM20B-201ENST00000263733 CCDC81Q6ZN84 652 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 PRUNE1Q86TP1 453 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 ZNF560Q96MR9 790 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 CTNNAL1Q9UBT7 734 aa20.25■□□□□ 0.83
FAM20B-201ENST00000263733 NFKBIAP25963 317 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms