RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 MMP13P45452 471 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 CCNG1P51959 295 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 HIRAP54198 1017 aaPredicted RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 NDUFA5Q16718 116 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 EXOC3L4Q17RC7 722 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 SMU1Q2TAY7 513 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 SPDYE2Q495Y8 402 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 ZNF658Q5TYW1 1059 aaPredicted RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 DGKHQ86XP1 1220 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 BTBD10Q9BSF8 475 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 CCSER1Q9C0I3 900 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 ALDH8A1Q9H2A2 487 aaPredicted RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 NEUROG2Q9H2A3 272 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 TRPV5Q9NQA5 729 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 FAIMQ9NVQ4 179 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 PCDHA12Q9UN75 941 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 MRPL11Q9Y3B7 192 aaKnown RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 LAMA4Q16363 1823 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 SYCE1LA8MT33 242 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 FOXO6A8MYZ6 492 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 SH3BP5O60239 455 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 ENTPD3O75355 529 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 MFN2O95140 757 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 GH1P01241 217 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 SHMT1P34896 483 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 SKIV2L2P42285 1042 aaKnown RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 ENTPD1P49961 510 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 C4orf33Q8N1A6 199 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 POU5F2Q8N7G0 328 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 C1orf131Q8NDD1 294 aaKnown RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 IGDCC4Q8TDY8 1250 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 FAM49AQ9H0Q0 323 aaPredicted RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 WDR6Q9NNW5 1121 aaKnown RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 GIN1Q9NXP7 522 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 TXNDC16Q9P2K2 825 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 PRR12Q9ULL5 1215 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 FAM32AQ9Y421 112 aaKnown RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 TAF1P21675 1872 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.75□□□□□ -1.01
LDB3-201ENST00000263066 PPP1R3GB7ZBB8 358 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 SEMA3DO95025 777 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 KRT7P08729 469 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 CDK4P11802 303 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 ANPEPP15144 967 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 HMOX2P30519 316 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 SLC5A3P53794 718 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 RGS21Q2M5E4 152 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 ANKDD1AQ495B1 522 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 CLVS1Q8IUQ0 354 aaPredicted RBP8.75□□□□□ -1.01
LDB3-201ENST00000263066 SYCE1Q8N0S2 351 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 NUP93Q8N1F7 819 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 SLITRK6Q9H5Y7 841 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 SLCO1B3Q9NPD5 702 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 STX18Q9P2W9 335 aaKnown RBP8.75□□□□□ -1.01
LDB3-201ENST00000263066 DTNAQ9Y4J8 743 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 ANKRD36CQ5JPF3 1778 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 NWD2Q9ULI1 1742 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 C15orf38-AP3S2A0A0A6YYH1 394 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 A0A1W2PQC6 194 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 GABBR2O75899 941 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 P4HA1P13674 534 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 MAPK10P53779 464 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 PRAMEP78395 509 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 LPCAT4Q643R3 524 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 C16orf86Q6ZW13 317 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 ARPINQ7Z6K5 226 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 GOLM1Q8NBJ4 401 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 BBOF1Q8ND07 529 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 CITED4Q96RK1 184 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 HNRNPABQ99729 332 aaKnown RBP8.75□□□□□ -1.01
LDB3-201ENST00000263066 IL17RBQ9NRM6 502 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 TBCCD1Q9NVR7 557 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 GIT1Q9Y2X7 761 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 SRPRBQ9Y5M8 271 aaKnown RBP8.75□□□□□ -1.01
LDB3-201ENST00000263066 POTEMA6NI47 508 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 CCRL2O00421 344 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 SPOPO43791 374 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 PEX1O43933 1283 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 FOXD2O60548 495 aaPredicted RBP8.75□□□□□ -1.01
LDB3-201ENST00000263066 BMP15O95972 392 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 GM2AP17900 193 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 ADCY8P40145 1251 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 ASPRV1Q53RT3 343 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 EMC10Q5UCC4 262 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 ANKMY2Q8IV38 441 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 BRSK2Q8IWQ3 736 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 GDPD5Q8WTR4 605 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 PGM2Q96G03 612 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 IFT122Q9HBG6 1241 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 KIAA1586Q9HCI6 787 aa8.75□□□□□ -1.01
LDB3-201ENST00000263066 DDX25Q9UHL0 483 aaKnown RBP8.75□□□□□ -1.01
LDB3-201ENST00000263066 UMODL1Q5DID0 1318 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 FAM205AQ6ZU69 1335 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 MYPNQ86TC9 1320 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 EXOC1LA0A1B0GW35 172 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 PSMD11O00231 422 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 HNRNPCL1O60812 293 aaKnown RBP8.74□□□□□ -1.01
LDB3-201ENST00000263066 TDP2O95551 362 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 H2AFZP0C0S5 128 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 SRGAP2CP0DJJ0 459 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms