RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 CCDC159P0C7I6 412 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 RPA1P27694 616 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 LRRC36Q1X8D7 754 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 NBPF20Q3BBV1 942 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 C16orf87Q6PH81 154 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 ZFPM1Q8IX07 1006 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 MIER2Q8N344 545 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 EDEM1Q92611 657 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 MED14O60244 1454 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 CXCL8P10145 99 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 CKBP12277 381 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 SLC1A1P43005 524 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 PIGHQ14442 188 aaPredicted RBP12.69□□□□□ -0.38
SPG11-201ENST00000261866 MROH9Q5TGP6 573 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 PRR23CQ6ZRP0 262 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 GPRASP2Q96D09 838 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 ASPSCR1Q9BZE9 553 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 CHST12Q9NRB3 414 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 TMEM161AQ9NX61 479 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 PCDHAC2Q9Y5I4 1007 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 MRFAP1Q9Y605 127 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 PIK3C2BO00750 1634 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 TCP11X1B4DZS4 312 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 RHOBTB3O94955 611 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 RAG1P15918 1043 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 SLC18A3Q16572 532 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 MOB2Q70IA6 237 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 RPAINQ86UA6 219 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 SH2D3CQ8N5H7 860 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 THAP2Q9H0W7 228 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 KDM4CQ9H3R0 1056 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 TGFB2P61812 414 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 RIT2Q99578 217 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 TUBB6Q9BUF5 446 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 SCUBE2Q9NQ36 999 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 SLC39A10Q9ULF5 831 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 ADORA2AP29274 412 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 NME5P56597 212 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 GRB10Q13322 594 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 CUL2Q13617 745 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 BYSLQ13895 437 aaKnown RBP12.69□□□□□ -0.38
SPG11-201ENST00000261866 ZDHHC15Q96MV8 337 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 ARHGAP26Q9UNA1 814 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 SLC12A8A0AV02 714 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 UNC13BO14795 1591 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 TBX3O15119 743 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 KLRC2P26717 231 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 SPATA4Q8NEY3 305 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 CYP2W1Q8TAV3 490 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 LRRC37BQ96QE4 947 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 BRD8Q9H0E9 1235 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 OSGEPL1Q9H4B0 414 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 AGPAT3Q9NRZ7 376 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 PURBQ96QR8 312 aaKnown RBP12.68□□□□□ -0.38
SPG11-201ENST00000261866 RNF208Q9H0X6 261 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.68□□□□□ -0.38
SPG11-201ENST00000261866 GRID2IPA4D2P6 1211 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 F5H5T6 163 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 ITGB6P18564 788 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 CYP2C19P33261 490 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 JADE3Q92613 823 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 TRIM45Q9H8W5 580 aaPredicted RBP12.68□□□□□ -0.38
SPG11-201ENST00000261866 NPTX2P47972 431 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 HERVK_113P62684 666 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 KRT72Q14CN4 511 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 E2F4Q16254 413 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 P2RX7Q99572 595 aaKnown RBP12.68□□□□□ -0.38
SPG11-201ENST00000261866 SPATC1LQ9H0A9 340 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.68□□□□□ -0.38
SPG11-201ENST00000261866 PPRC1Q5VV67 1664 aaKnown RBP12.68□□□□□ -0.38
SPG11-201ENST00000261866 CBX4O00257 560 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 PHF2O75151 1096 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 LMNAP02545 664 aaKnown RBP12.68□□□□□ -0.38
SPG11-201ENST00000261866 ADCYAP1R1P41586 468 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 PTGISQ16647 500 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 LLGL2Q6P1M3 1020 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 MTA3Q9BTC8 594 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 PIH1D1Q9NWS0 290 aaKnown RBP12.68□□□□□ -0.38
SPG11-201ENST00000261866 UBQLN1Q9UMX0 589 aaKnown RBP12.68□□□□□ -0.38
SPG11-201ENST00000261866 ARRDC4Q8NCT1 418 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 SLC16A10Q8TF71 515 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 ATG4AQ8WYN0 398 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 NFKBIZQ9BYH8 718 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 RERGLQ9H628 205 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 LZTS1Q9Y250 596 aa12.68□□□□□ -0.38
SPG11-201ENST00000261866 PCDH8O95206 1070 aa12.67□□□□□ -0.38
SPG11-201ENST00000261866 SLURP2P0DP57 97 aa12.67□□□□□ -0.38
SPG11-201ENST00000261866 ENO3P13929 434 aaPredicted RBP12.67□□□□□ -0.38
SPG11-201ENST00000261866 CNTN2Q02246 1040 aa12.67□□□□□ -0.38
SPG11-201ENST00000261866 C3orf62Q6ZUJ4 267 aa12.67□□□□□ -0.38
SPG11-201ENST00000261866 ANGPT2O15123 496 aa12.67□□□□□ -0.38
SPG11-201ENST00000261866 PTPN7P35236 360 aa12.67□□□□□ -0.38
SPG11-201ENST00000261866 SLC11A2P49281 568 aa12.67□□□□□ -0.38
SPG11-201ENST00000261866 KPNA1P52294 538 aaPredicted RBP12.67□□□□□ -0.38
SPG11-201ENST00000261866 PTK7Q13308 1070 aa12.67□□□□□ -0.38
SPG11-201ENST00000261866 TBC1D19Q8N5T2 526 aa12.67□□□□□ -0.38
SPG11-201ENST00000261866 KCTD10Q9H3F6 313 aa12.67□□□□□ -0.38
SPG11-201ENST00000261866 MEGF6O75095 1541 aa12.67□□□□□ -0.38
SPG11-201ENST00000261866 LUC7L3O95232 432 aaKnown RBP12.67□□□□□ -0.38
SPG11-201ENST00000261866 THP07101 528 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms