RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 KATNAL2Q8IYT4 538 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 TMEM130Q8N3G9 435 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 C7orf31Q8N865 590 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 C1orf127Q8N9H9 656 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 ATP6V1G3Q96LB4 118 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 RUFY1Q96T51 708 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 FMO2Q99518 471 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 SDCBP2Q9H190 292 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 VRTNQ9H8Y1 702 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 PRDM5Q9NQX1 630 aaPredicted RBP18.71■□□□□ 0.59
SSB-201ENST00000260956 SETD4Q9NVD3 440 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 NEU2Q9Y3R4 380 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 SCINQ9Y6U3 715 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 TMEM191CA6NGB0 347 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 DCDC2CA8MYV0 355 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 GJB6O95452 261 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 TMEM191BP0C7N4 346 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 ADAM17P78536 824 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 TFAMQ00059 246 aaKnown RBP18.71■□□□□ 0.59
SSB-201ENST00000260956 ZNF699Q32M78 642 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 KDM7AQ6ZMT4 941 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 FBXO25Q8TCJ0 367 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 KATNAL1Q9BW62 490 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 LRRC4CQ9HCJ2 640 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 RASAL2Q9UJF2 1139 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 MTUS1Q9ULD2 1270 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 A0A087WZ62 844 aa18.7■□□□□ 0.58
SSB-201ENST00000260956 PODXLO00592 558 aa18.7■□□□□ 0.58
SSB-201ENST00000260956 HNRNPH2P55795 449 aaKnown RBP18.7■□□□□ 0.58
SSB-201ENST00000260956 OR2W6PQ8NHA6 318 aa18.7■□□□□ 0.58
SSB-201ENST00000260956 FEZF2Q8TBJ5 459 aa18.7■□□□□ 0.58
SSB-201ENST00000260956 FDXACB1Q9BRP7 624 aaPredicted RBP18.7■□□□□ 0.58
SSB-201ENST00000260956 TRIM31Q9BZY9 425 aa18.7■□□□□ 0.58
SSB-201ENST00000260956 ZNF518BQ9C0D4 1074 aa18.7■□□□□ 0.58
SSB-201ENST00000260956 MRPL47Q9HD33 250 aaKnown RBP18.7■□□□□ 0.58
SSB-201ENST00000260956 TMEM39AQ9NV64 488 aa18.7■□□□□ 0.58
SSB-201ENST00000260956 POLIQ9UNA4 740 aa18.7■□□□□ 0.58
SSB-201ENST00000260956 SNX24Q9Y343 169 aa18.7■□□□□ 0.58
SSB-201ENST00000260956 CITO14578 2027 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 KIAA0355O15063 1070 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 TREHO43280 583 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 NUDT17P0C025 328 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 IVDP26440 423 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 GBP1P32455 592 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 OGDHQ02218 1023 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 DHX9Q08211 1270 aaKnown RBP18.69■□□□□ 0.58
SSB-201ENST00000260956 PTGISQ16647 500 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 ZSCAN26Q16670 478 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 RHBDF2Q6PJF5 856 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 MTHFD1LQ6UB35 978 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 ART4Q93070 314 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 FAM129AQ9BZQ8 928 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 DCLK3Q9C098 648 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 CHST7Q9NS84 486 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 PARVAQ9NVD7 372 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 NR2E3Q9Y5X4 410 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 LACTBL1A8MY62 500 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 HMGB1P1B2RPK0 211 aaPredicted RBP18.69■□□□□ 0.58
SSB-201ENST00000260956 TNNC2P02585 160 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 CALB1P05937 261 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 WEE2P0C1S8 567 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 STAG3L1P0CL83 205 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 ARF4P18085 180 aaPredicted RBP18.69■□□□□ 0.58
SSB-201ENST00000260956 CD58P19256 250 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 EIF4BP23588 611 aaKnown RBP18.69■□□□□ 0.58
SSB-201ENST00000260956 GSCP56915 257 aaPredicted RBP18.69■□□□□ 0.58
SSB-201ENST00000260956 RPL7AP62424 266 aaKnown RBP18.69■□□□□ 0.58
SSB-201ENST00000260956 PTPN11Q06124 597 aaPredicted RBP18.69■□□□□ 0.58
SSB-201ENST00000260956 CEP85LQ5SZL2 805 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 RHOT1Q8IXI2 618 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 GOLGA6L1Q8N7Z2 621 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 FAM212AQ96EL1 285 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 ANKRD36BP1Q96IX9 119 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 RPF1Q9H9Y2 349 aaKnown RBP18.69■□□□□ 0.58
SSB-201ENST00000260956 CYTH4Q9UIA0 394 aa18.69■□□□□ 0.58
SSB-201ENST00000260956 R3HDM2Q9Y2K5 976 aaKnown RBP18.69■□□□□ 0.58
SSB-201ENST00000260956 PDCD11Q14690 1871 aaKnown RBP18.68■□□□□ 0.58
SSB-201ENST00000260956 TSPAN1O60635 241 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 TCF4P15884 667 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 KCNJ1P48048 391 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 IRAK1P51617 712 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 RAD23BP54727 409 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 OSTNP61366 133 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 IGBP1P78318 339 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 TRPC3Q13507 836 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 SLC10A6Q3KNW5 377 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 JADE1Q6IE81 842 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 NIPA2Q8N8Q9 360 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 SEZ6LQ9BYH1 1024 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 PPP1R12CQ9BZL4 782 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 LHX5Q9H2C1 402 aa18.68■□□□□ 0.58
SSB-201ENST00000260956 TRIP12Q14669 1992 aaPredicted RBP18.68■□□□□ 0.58
SSB-201ENST00000260956 TLR3O15455 904 aaKnown RBP18.67■□□□□ 0.58
SSB-201ENST00000260956 CSDE1O75534 798 aaKnown RBP18.67■□□□□ 0.58
SSB-201ENST00000260956 VTNP04004 478 aa18.67■□□□□ 0.58
SSB-201ENST00000260956 CYP2C18P33260 490 aa18.67■□□□□ 0.58
SSB-201ENST00000260956 PTK6Q13882 451 aa18.67■□□□□ 0.58
SSB-201ENST00000260956 UBAP2Q5T6F2 1119 aaKnown RBP18.67■□□□□ 0.58
SSB-201ENST00000260956 LRRC38Q5VT99 294 aa18.67■□□□□ 0.58
SSB-201ENST00000260956 KCTD16Q68DU8 428 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms