RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 C18orf25Q96B23 403 aaPredicted RBP13.86□□□□□ -0.19
THSD1-201ENST00000258613 SLITRK1Q96PX8 696 aa13.86□□□□□ -0.19
THSD1-201ENST00000258613 TMEM121Q9BTD3 319 aa13.86□□□□□ -0.19
THSD1-201ENST00000258613 FAM49BQ9NUQ9 324 aa13.86□□□□□ -0.19
THSD1-201ENST00000258613 PRMT7Q9NVM4 692 aaPredicted RBP13.86□□□□□ -0.19
THSD1-201ENST00000258613 SNTG2Q9NY99 539 aa13.86□□□□□ -0.19
THSD1-201ENST00000258613 KLK14Q9P0G3 267 aa13.86□□□□□ -0.19
THSD1-201ENST00000258613 TBK1Q9UHD2 729 aa13.86□□□□□ -0.19
THSD1-201ENST00000258613 PNMA3Q9UL41 463 aa13.86□□□□□ -0.19
THSD1-201ENST00000258613 LAMA3Q16787 3333 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 GOLGA8MH3BSY2 632 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 M0QYV0 167 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 GAS2O43903 313 aaKnown RBP13.85□□□□□ -0.19
THSD1-201ENST00000258613 RPS6KA5O75582 802 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 MAP3K6O95382 1288 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 PSMA2P25787 234 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 SLC26A2P50443 739 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 CCNA1P78396 465 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 GAD2Q05329 585 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 CDO1Q16878 200 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 C12orf50Q8NA57 414 aaPredicted RBP13.85□□□□□ -0.19
THSD1-201ENST00000258613 OR6J1Q8NGC5 347 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 MRRFQ96E11 262 aaKnown RBP13.85□□□□□ -0.19
THSD1-201ENST00000258613 SELENOSQ9BQE4 189 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 FLRT1Q9NZU1 646 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 MTRF1LQ9UGC7 380 aaKnown RBP13.85□□□□□ -0.19
THSD1-201ENST00000258613 IP6K2Q9UHH9 426 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 SLC12A6Q9UHW9 1150 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 SCINQ9Y6U3 715 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 NPTXRO95502 500 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 MMP3P08254 477 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 CETPP11597 493 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 KRT3P12035 628 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 IGFBP6P24592 240 aaPredicted RBP13.85□□□□□ -0.19
THSD1-201ENST00000258613 NDST1P52848 882 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 BEX3Q00994 111 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 ACVR2BQ13705 512 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 ZNF484Q5JVG2 852 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 KATNAL2Q8IYT4 538 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 LINC01465Q8N7H1 131 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 KIF12Q96FN5 646 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 PLVAPQ9BX97 442 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 CACNG4Q9UBN1 327 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 ZNF148Q9UQR1 794 aa13.85□□□□□ -0.19
THSD1-201ENST00000258613 MICAL2O94851 1124 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 PTPN11Q06124 597 aaPredicted RBP13.84□□□□□ -0.19
THSD1-201ENST00000258613 PTGISQ16647 500 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 QPCTQ16769 361 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 CCDC142Q17RM4 750 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 P3H1Q32P28 736 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 CYP4F22Q6NT55 531 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 RUFY4Q6ZNE9 571 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 SHCBP1Q8NEM2 672 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 VCPIP1Q96JH7 1222 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 JPH2Q9BR39 696 aaPredicted RBP13.84□□□□□ -0.19
THSD1-201ENST00000258613 TINF2Q9BSI4 451 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 TUBGCP4Q9UGJ1 667 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 NME7Q9Y5B8 376 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 PSTPIP1O43586 416 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 IVLP07476 585 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 ATF2P15336 505 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 IBSPP21815 317 aaPredicted RBP13.84□□□□□ -0.19
THSD1-201ENST00000258613 AP3M2P53677 418 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 PPP2R2AP63151 447 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 TMEM132DQ14C87 1099 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 PPP1R15BQ5SWA1 713 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 SRLQ86TD4 932 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 SESTD1Q86VW0 696 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 ATL2Q8NHH9 583 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 TMEM40Q8WWA1 233 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 DPP3Q9NY33 737 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 ANAPC5Q9UJX4 755 aa13.84□□□□□ -0.19
THSD1-201ENST00000258613 MYO1CO00159 1063 aa13.83□□□□□ -0.19
THSD1-201ENST00000258613 LRCH4O75427 683 aa13.83□□□□□ -0.19
THSD1-201ENST00000258613 CALB1P05937 261 aa13.83□□□□□ -0.19
THSD1-201ENST00000258613 HOXA11P31270 313 aaPredicted RBP13.83□□□□□ -0.19
THSD1-201ENST00000258613 FASTKD3Q14CZ7 662 aaKnown RBP13.83□□□□□ -0.19
THSD1-201ENST00000258613 C15orf59Q2T9L4 293 aaPredicted RBP13.83□□□□□ -0.19
THSD1-201ENST00000258613 TRNP1Q6NT89 227 aa13.83□□□□□ -0.19
THSD1-201ENST00000258613 SPOCD1Q6ZMY3 1216 aa13.83□□□□□ -0.19
THSD1-201ENST00000258613 ZNF365Q70YC5 407 aa13.83□□□□□ -0.19
THSD1-201ENST00000258613 EXD1Q8NHP7 514 aa13.83□□□□□ -0.19
THSD1-201ENST00000258613 HSPH1Q92598 858 aa13.83□□□□□ -0.19
THSD1-201ENST00000258613 CCT8L2Q96SF2 557 aa13.83□□□□□ -0.19
THSD1-201ENST00000258613 BCO2Q9BYV7 579 aa13.83□□□□□ -0.19
THSD1-201ENST00000258613 MAGEB5Q9BZ81 275 aa13.83□□□□□ -0.19
THSD1-201ENST00000258613 RRAGCQ9HB90 399 aa13.83□□□□□ -0.19
THSD1-201ENST00000258613 GOLGA2P5Q9HBQ8 144 aa13.83□□□□□ -0.19
THSD1-201ENST00000258613 GBA2Q9HCG7 927 aaPredicted RBP13.83□□□□□ -0.19
THSD1-201ENST00000258613 MMRN1Q13201 1228 aa13.83□□□□□ -0.2
THSD1-201ENST00000258613 GRM1Q13255 1194 aa13.83□□□□□ -0.2
THSD1-201ENST00000258613 IZUMO3Q5VZ72 239 aa13.83□□□□□ -0.2
THSD1-201ENST00000258613 ACOT1Q86TX2 421 aa13.83□□□□□ -0.2
THSD1-201ENST00000258613 CCDC33Q8N5R6 958 aa13.83□□□□□ -0.2
THSD1-201ENST00000258613 MGARPQ8TDB4 240 aa13.83□□□□□ -0.2
THSD1-201ENST00000258613 SNF8Q96H20 258 aa13.83□□□□□ -0.2
THSD1-201ENST00000258613 ACAP3Q96P50 834 aa13.83□□□□□ -0.2
THSD1-201ENST00000258613 MRPL45Q9BRJ2 306 aaKnown RBP13.83□□□□□ -0.2
THSD1-201ENST00000258613 B3GNT5Q9BYG0 378 aa13.83□□□□□ -0.2
THSD1-201ENST00000258613 NXF3Q9H4D5 531 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms