RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 DARS2Q6PI48 645 aaKnown RBP9.59□□□□□ -0.87
CKAP2-201ENST00000258607 CES3Q6UWW8 571 aa9.59□□□□□ -0.87
CKAP2-201ENST00000258607 TMC3Q7Z5M5 1100 aa9.59□□□□□ -0.87
CKAP2-201ENST00000258607 PLEKHH3Q7Z736 793 aa9.59□□□□□ -0.87
CKAP2-201ENST00000258607 ZC3H3Q8IXZ2 948 aaKnown RBP9.59□□□□□ -0.87
CKAP2-201ENST00000258607 PYROXD2Q8N2H3 581 aa9.59□□□□□ -0.87
CKAP2-201ENST00000258607 OLIG1Q8TAK6 271 aa9.59□□□□□ -0.87
CKAP2-201ENST00000258607 TCP11Q8WWU5 503 aa9.59□□□□□ -0.87
CKAP2-201ENST00000258607 MAML3Q96JK9 1138 aa9.59□□□□□ -0.87
CKAP2-201ENST00000258607 AP5M1Q9H0R1 490 aa9.59□□□□□ -0.87
CKAP2-201ENST00000258607 ISCUQ9H1K1 167 aa9.59□□□□□ -0.87
CKAP2-201ENST00000258607 CARD9Q9H257 536 aa9.59□□□□□ -0.87
CKAP2-201ENST00000258607 CDC42EP4Q9H3Q1 356 aaKnown RBP9.59□□□□□ -0.87
CKAP2-201ENST00000258607 SIX4Q9UIU6 781 aa9.59□□□□□ -0.87
CKAP2-201ENST00000258607 MFHAS1Q9Y4C4 1052 aa9.59□□□□□ -0.87
CKAP2-201ENST00000258607 TRIP12Q14669 1992 aaPredicted RBP9.59□□□□□ -0.87
CKAP2-201ENST00000258607 CNTNAP2Q9UHC6 1331 aa9.59□□□□□ -0.87
CKAP2-201ENST00000258607 ASB14A6NK59 587 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 USP12O75317 370 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 TRPA1O75762 1119 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 MICAL2O94851 1124 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 MLH1P40692 756 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 NDUFV1P49821 464 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 YWHAGP61981 247 aaKnown RBP eCLIP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 PITX1P78337 314 aaPredicted RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 OTUD4Q01804 1114 aaKnown RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 MBTD1Q05BQ5 628 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 SGSM1Q2NKQ1 1148 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 NAP1L3Q99457 506 aaPredicted RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 PRMT1Q99873 361 aaKnown RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 ELAC2Q9BQ52 826 aaKnown RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 PLVAPQ9BX97 442 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 CHMP2BQ9UQN3 213 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 SNX10Q9Y5X0 201 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 GOLGA6L7A0A1B0GV03 622 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 RASGRF2O14827 1237 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 GRIN3BO60391 1043 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 C22orf31O95567 290 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 ITGBL1O95965 494 aaPredicted RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 ASS1P00966 412 aaKnown RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 SLC4A1P02730 911 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 GMPRP36959 345 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 EFNA5P52803 228 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 PGGT1BP53609 377 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 PTPN11Q06124 597 aaPredicted RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 PDIA2Q13087 525 aaKnown RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 DGKDQ16760 1214 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 PNPLA1Q8N8W4 532 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 ACTRT1Q8TDG2 376 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 TMC2Q8TDI7 906 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 USP33Q8TEY7 942 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 VPS33BQ9H267 617 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 HESX1Q9UBX0 185 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 ADAMTS5Q9UNA0 930 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 RRP15Q9Y3B9 282 aaKnown RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 CAPN9O14815 690 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 KIAA0391O15091 583 aaKnown RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 KIAA0754O94854 1291 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 OR4Q2P0C623 313 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 SMIM10L2AP0DMW4 78 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 SMIM10L2BP0DMW5 78 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 THPOP40225 353 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 PTENP60484 403 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 HIC1Q14526 733 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 SEPT7Q16181 437 aaKnown RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 DCAF6Q58WW2 860 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 MTHFD1LQ6UB35 978 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 MICALCLQ6ZW33 695 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 RHOT1Q8IXI2 618 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 SLC2A14Q8TDB8 520 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 IPO4Q8TEX9 1081 aaKnown RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 RXFP2Q8WXD0 754 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 EXOC4Q96A65 974 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 FAM167AQ96KS9 214 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 ATP6V1G3Q96LB4 118 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 RBM15Q96T37 977 aaKnown RBP eCLIP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 NTPCRQ9BSD7 190 aaKnown RBP9.58□□□□□ -0.88
CKAP2-201ENST00000258607 PDZD7Q9H5P4 517 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 GDF3Q9NR23 364 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 PARVAQ9NVD7 372 aa9.58□□□□□ -0.88
CKAP2-201ENST00000258607 NUP205Q92621 2012 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 NT5C1B-RDH14C9J2C7 533 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 GOLGA8KD6RF30 607 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 GOLGA8TH3BQL2 631 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 AOC2O75106 756 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 APRTP07741 180 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 CHN1P15882 459 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 PECAM1P16284 738 aaPredicted RBP9.57□□□□□ -0.88
CKAP2-201ENST00000258607 ACO1P21399 889 aaKnown RBP9.57□□□□□ -0.88
CKAP2-201ENST00000258607 RFC5P40937 340 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 FBXW10Q5XX13 1052 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 SPATA18Q8TC71 538 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 PIK3R5Q8WYR1 880 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 SPOCK2Q92563 424 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 PDLIM7Q9NR12 457 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 SYNPO2Q9UMS6 1093 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 STXBP5LQ9Y2K9 1186 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 CCDC195A0A1B0GUA6 201 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 H0YCG3 227 aa9.57□□□□□ -0.88
CKAP2-201ENST00000258607 CCDC188H7C350 402 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms