RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 PHF20Q9BVI0 1012 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 SPATA16Q9BXB7 569 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ZSCAN32Q9NX65 697 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 BCS1LQ9Y276 419 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 LAMB1P07942 1786 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ZNF335Q9H4Z2 1342 aaPredicted RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 NCOA3Q9Y6Q9 1424 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 NPHP3-ACAD11A0A0J9YXS1 232 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 USP17L10C9JJH3 530 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ANKRD65E5RJM6 399 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 TRIM13O60858 407 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 PPP3CCP48454 512 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 NUDT2P50583 147 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 VEPH1Q14D04 833 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ZNF394Q53GI3 561 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 DIS3LQ8TF46 1054 aaKnown RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 MAP3K14Q99558 947 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ENOPH1Q9UHY7 261 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 H7C1W4 665 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 EEF2KO00418 725 aaKnown RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 XPO1O14980 1071 aaKnown RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 CD4P01730 458 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 AGAP9Q5VTM2 703 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 EEPD1Q7L9B9 569 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 THNSL1Q8IYQ7 743 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 SCFD2Q8WU76 684 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 HIC2Q96JB3 615 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 PRRG3Q9BZD7 231 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 DTNAQ9Y4J8 743 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 TRAPPC3O43617 180 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 RRM2P31350 389 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 UBE3AQ05086 875 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 SPATA2LQ8IUW3 424 aaPredicted RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 CENPLQ8N0S6 344 aaPredicted RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 PLA2G12BQ9BX93 195 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 PCDHA10Q9Y5I2 948 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 B2RBV5 119 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 NFIBO00712 420 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 TBX3O15119 743 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 CYP2D6P10635 497 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 TGM2P21980 687 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 ADSSL1Q8N142 457 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 CASP10Q92851 521 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 GLMNQ92990 594 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 ZIM3Q96PE6 472 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 ZBTB1Q9Y2K1 713 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 ATXN2Q99700 1313 aaKnown RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 SAC3D1A6NKF1 404 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 TRIM24O15164 1050 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 MAFGO15525 162 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 ECE2O60344 883 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 RAD17O75943 681 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 MLNP12872 115 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 BAG6P46379 1132 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 MAPK7Q13164 816 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 E2F7Q96AV8 911 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 HES6Q96HZ4 224 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 MAGED4Q96JG8 741 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 FANCEQ9HB96 536 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 EIF4E1BA6NMX2 242 aaKnown RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 HIST1H2AGP0C0S8 130 aaPredicted RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 TCF3P15923 654 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 HIST1H2ADP20671 130 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 RFC5P40937 340 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 ANXA11P50995 505 aaKnown RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 HIST1H2AHQ96KK5 128 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 ZNF512BQ96KM6 892 aaPredicted RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 CHP1Q99653 195 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 HIST1H2AJQ99878 128 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 H2AFJQ9BTM1 129 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 TMEM117Q9H0C3 514 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 RHBDL2Q9NX52 303 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 ZMYND8Q9ULU4 1186 aaPredicted RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 ZC3H4Q9UPT8 1303 aaKnown RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 SPATA31D1Q6ZQQ2 1576 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 SETD1AO15047 1707 aaKnown RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 DGAT1O75907 488 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 SSTR3P32745 418 aaPredicted RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 COILP38432 576 aaPredicted RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 GALCP54803 685 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 SESN2P58004 480 aaPredicted RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 POU4F1Q01851 419 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 FMR1Q06787 632 aaKnown RBP eCLIP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 USP10Q14694 798 aaKnown RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 ARHGAP17Q68EM7 881 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 ZFP1Q6P2D0 407 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 HAUS6Q7Z4H7 955 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 SUGP1Q8IWZ8 645 aaKnown RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 SHCBP1Q8NEM2 672 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 SLC30A5Q8TAD4 765 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 CAVIN3Q969G5 261 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 MKNK1Q9BUB5 465 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 DIP2CQ9Y2E4 1556 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 TMEM191CA6NGB0 347 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 STX7O15400 261 aaKnown RBP4.99□□□□□ -1.61
RC3H1-201ENST00000258349 BNIP3LO60238 219 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 ATP6V1B1P15313 513 aa4.99□□□□□ -1.61
RC3H1-201ENST00000258349 SWSAP1Q6NVH7 229 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms