RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SYCE2Q6PIF2 218 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 DPH6Q7L8W6 267 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 TMC7Q7Z402 723 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF366Q8N895 744 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 CSRNP2Q9H175 543 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 VPS11Q9H270 941 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 TOR4AQ9NXH8 423 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 SAC3D1A6NKF1 404 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 PSTPIP1O43586 416 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 TMEM127O75204 238 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 PSIP1O75475 530 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 FBXO21O94952 628 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 PSMG1O95456 288 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 CYP7A1P22680 504 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 KCNJ2P63252 427 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 CYP4A11Q02928 519 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 DSC3Q14574 896 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 CCDC157Q569K6 752 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 TTMPQ5BVD1 217 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 CYP4A22Q5TCH4 519 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 CCDC105Q8IYK2 499 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 CRACR2BQ8N4Y2 399 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 NDFIP2Q9NV92 336 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 THAP1Q9NVV9 213 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 RGS17Q9UGC6 210 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 HERC5Q9UII4 1024 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 DENND2AQ9ULE3 1009 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 AP3M1Q9Y2T2 418 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 FLT1P17948 1338 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 SSH2Q76I76 1423 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 BTBD19C9JJ37 291 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 TRAF5O00463 557 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 SCAMP1O15126 338 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 PON1P27169 355 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 ABCG1P45844 678 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 POU5F1BQ06416 359 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 RBL2Q08999 1139 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 SLC15A2Q16348 729 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 EAPPQ56P03 285 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 TMEM67Q5HYA8 995 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 MMAAQ8IVH4 418 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 SCFD1Q8WVM8 642 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 IPCEF1Q8WWN9 437 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 TMBIM4Q9HC24 238 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 COX16Q9P0S2 106 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 ANAPC5Q9UJX4 755 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 H7C2Y5 167 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 MYO1DO94832 1006 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 CBX5P45973 191 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 SULT1E1P49888 294 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 KDSRQ06136 332 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 TMEM62Q0P6H9 643 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 PDK3Q15120 406 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 NFE2Q16621 373 aaPredicted RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 CCDC142Q17RM4 750 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 RWDD4Q6NW29 188 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 POLNQ7Z5Q5 900 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 TTC7BQ86TV6 843 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 AFG1LQ8WV93 481 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 MMS19Q96T76 1030 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 LSG1Q9H089 658 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 USP44Q9H0E7 712 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 TMEM168Q9H0V1 697 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 AVENQ9NQS1 362 aaPredicted RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 HAO1Q9UJM8 370 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 PCDHGA11Q9Y5H2 935 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 PCDHGA10Q9Y5H3 936 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 CCDC188H7C350 402 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 NDUFA10O95299 355 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 ECDO95905 644 aaPredicted RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 MARCKSP29966 332 aaPredicted RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 XIAPP98170 497 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 TRAF2Q12933 501 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 C4orf46Q504U0 113 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 SLC9C2Q5TAH2 1124 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 POTEAQ6S8J7 498 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 STOX1Q6ZVD7 989 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 ACAD11Q709F0 780 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 NRKQ7Z2Y5 1582 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 MIB1Q86YT6 1006 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 LINC00469Q8N7U9 141 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 SYT15Q9BQS2 421 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 C8orf33Q9H7E9 229 aaPredicted RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 KMT5AQ9NQR1 393 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 MAGEB6P1A0A0J9YX57 407 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 TRIM24O15164 1050 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 KPNA6O60684 536 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 FGAP02671 866 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 HMGN1P05114 100 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 MAPK4P31152 587 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 METTL2BQ6P1Q9 378 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 C3orf67Q6ZVT6 689 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 MMGT1Q8N4V1 131 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 EPS8L3Q8TE67 593 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 FAM89AQ96GI7 184 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 SRP68Q9UHB9 627 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 ACAD8Q9UKU7 415 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 PRKAB1Q9Y478 270 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 A0A087WXM4 84 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 SH3PXD2BA1X283 911 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms