RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 GBP1P32455 592 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 NSFP46459 744 aaKnown RBP11.9□□□□□ -0.5
PDE6B-201ENST00000255622 SP2Q02086 613 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDE6B-201ENST00000255622 PABPC1LQ4VXU2 614 aaKnown RBP11.9□□□□□ -0.5
PDE6B-201ENST00000255622 RHBDF2Q6PJF5 856 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 TMEM270Q6UE05 265 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 C15orf39Q6ZRI6 1047 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 DCLK3Q9C098 648 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 PDLIM7Q9NR12 457 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 ATP9BO43861 1147 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 GH1P01241 217 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 ENDOUP21128 410 aaKnown RBP11.9□□□□□ -0.5
PDE6B-201ENST00000255622 GTF2H1P32780 548 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 ADCY8P40145 1251 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 ACTR2P61160 394 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 FSTL1Q12841 308 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 BRDTQ58F21 947 aaPredicted RBP11.9□□□□□ -0.5
PDE6B-201ENST00000255622 TNFAIP8L3Q5GJ75 292 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 RASIP1Q5U651 963 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 MON1BQ7L1V2 547 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 LMNTD2Q8IXW0 634 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 CCDC197Q8NCU1 140 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 GABPB2Q8TAK5 448 aaPredicted RBP11.9□□□□□ -0.5
PDE6B-201ENST00000255622 SNF8Q96H20 258 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 FNBP1Q96RU3 617 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 SYT15Q9BQS2 421 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 SIKE1Q9BRV8 207 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 SEZ6LQ9BYH1 1024 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 DRC3Q9H069 523 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 GINM1Q9NU53 330 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 ARHGAP28Q9P2N2 729 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 TSC22D4Q9Y3Q8 395 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 TIMM22Q9Y584 194 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 PCDHB2Q9Y5E7 798 aa11.9□□□□□ -0.5
PDE6B-201ENST00000255622 DGAT1O75907 488 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 CETPP11597 493 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 HMGCS2P54868 508 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 ATP13A4Q4VNC1 1196 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 CRELD2Q6UXH1 353 aaPredicted RBP11.89□□□□□ -0.51
PDE6B-201ENST00000255622 CYP4X1Q8N118 509 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 ANKRD42Q8N9B4 389 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 ARHGEF2Q92974 986 aaKnown RBP11.89□□□□□ -0.51
PDE6B-201ENST00000255622 ARHGEF38Q9NXL2 777 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 WHRNQ9P202 907 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 TNS1Q9HBL0 1735 aaKnown RBP11.89□□□□□ -0.51
PDE6B-201ENST00000255622 LINC00854A0A1B0GVQ3 168 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 TMEM120BA0PK00 339 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 PI4K2BG5E9Z4 385 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 LIN7AO14910 233 aaPredicted RBP11.89□□□□□ -0.51
PDE6B-201ENST00000255622 PSAPP07602 524 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 YY1P25490 414 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 ZACNQ401N2 412 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 GDAP1Q8TB36 358 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 WDR60Q8WVS4 1066 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 STK32BQ9NY57 414 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 MAP3K20Q9NYL2 800 aaKnown RBP11.89□□□□□ -0.51
PDE6B-201ENST00000255622 SLC9A2Q9UBY0 812 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 LRRIQ4A6NIV6 560 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 EXTL3O43909 919 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 C4BPAP04003 597 aaKnown RBP11.89□□□□□ -0.51
PDE6B-201ENST00000255622 ACO1P21399 889 aaKnown RBP11.89□□□□□ -0.51
PDE6B-201ENST00000255622 GARTP22102 1010 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 CENPCQ03188 943 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 MPP2Q14168 576 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 TMEM132BQ14DG7 1078 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 WDR44Q5JSH3 913 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 CIAPIN1Q6FI81 312 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 TRMT10CQ7L0Y3 403 aaKnown RBP11.89□□□□□ -0.51
PDE6B-201ENST00000255622 USP37Q86T82 979 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 OR5B17Q8NGF7 314 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 DEPTORQ8TB45 409 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 ASAP3Q8TDY4 903 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 SLCO2A1Q92959 643 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 ACSF2Q96CM8 615 aaPredicted RBP11.89□□□□□ -0.51
PDE6B-201ENST00000255622 GPRASP2Q96D09 838 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 IFT74Q96LB3 600 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 RUNDC3BQ96NL0 473 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 TMEM109Q9BVC6 243 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 AGO2Q9UKV8 859 aaKnown RBP11.89□□□□□ -0.51
PDE6B-201ENST00000255622 CARD8Q9Y2G2 431 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 PCDHB4Q9Y5E5 795 aa11.89□□□□□ -0.51
PDE6B-201ENST00000255622 PARP14Q460N5 1801 aa11.88□□□□□ -0.51
PDE6B-201ENST00000255622 RGPD3A6NKT7 1758 aaPredicted RBP11.88□□□□□ -0.51
PDE6B-201ENST00000255622 RGPD4Q7Z3J3 1758 aa11.88□□□□□ -0.51
PDE6B-201ENST00000255622 HTR3EA5X5Y0 456 aa11.88□□□□□ -0.51
PDE6B-201ENST00000255622 TTLL13PA6NNM8 815 aa11.88□□□□□ -0.51
PDE6B-201ENST00000255622 THAP12O43422 761 aa11.88□□□□□ -0.51
PDE6B-201ENST00000255622 CYP1A1P04798 512 aaPredicted RBP11.88□□□□□ -0.51
PDE6B-201ENST00000255622 FDX1P10109 184 aa11.88□□□□□ -0.51
PDE6B-201ENST00000255622 ATF2P15336 505 aa11.88□□□□□ -0.51
PDE6B-201ENST00000255622 POLGP54098 1239 aaPredicted RBP11.88□□□□□ -0.51
PDE6B-201ENST00000255622 SH3BGRP55822 239 aaPredicted RBP11.88□□□□□ -0.51
PDE6B-201ENST00000255622 DRP2Q13474 957 aa11.88□□□□□ -0.51
PDE6B-201ENST00000255622 PTK6Q13882 451 aa11.88□□□□□ -0.51
PDE6B-201ENST00000255622 EMC2Q15006 297 aa11.88□□□□□ -0.51
PDE6B-201ENST00000255622 FAM133BQ5BKY9 247 aaKnown RBP11.88□□□□□ -0.51
PDE6B-201ENST00000255622 ANKRD20A2Q5SQ80 823 aa11.88□□□□□ -0.51
PDE6B-201ENST00000255622 HP1BP3Q5SSJ5 553 aaPredicted RBP11.88□□□□□ -0.51
PDE6B-201ENST00000255622 ANKRD20A1Q5TYW2 823 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms