RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 SMIM23A6NLE4 172 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 M0QYV0 167 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 F2P00734 622 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 ERBB2P04626 1255 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 ZNF865P0CJ78 1059 aaPredicted RBP15.56■□□□□ 0.08
MBD4-201ENST00000249910 SLC29A2Q14542 456 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 LEKR1Q6ZMV7 388 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 KATNAL2Q8IYT4 538 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 ARFGAP1Q8N6T3 406 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 C3orf20Q8ND61 904 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 CAPS2Q9BXY5 557 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 ZNF518BQ9C0D4 1074 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 TMBIM4Q9HC24 238 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 KLK14Q9P0G3 267 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 SAE1Q9UBE0 346 aaPredicted RBP15.56■□□□□ 0.08
MBD4-201ENST00000249910 TUBGCP4Q9UGJ1 667 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 GJD2Q9UKL4 321 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 SH3BP1Q9Y3L3 701 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 PASKQ96RG2 1323 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 GOLGA6L10A6NI86 522 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 HCRTO43612 131 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 MICAL2O94851 1124 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 CDH5P33151 784 aaPredicted RBP15.56■□□□□ 0.08
MBD4-201ENST00000249910 PMS2P54278 862 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 GUCY1A3Q02108 690 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 ICE2Q659A1 982 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 PIWIL1Q96J94 861 aaKnown RBP15.56■□□□□ 0.08
MBD4-201ENST00000249910 LPIN3Q9BQK8 851 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 ZWILCHQ9H900 591 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 SNX9Q9Y5X1 595 aa15.56■□□□□ 0.08
MBD4-201ENST00000249910 KCNA4P22459 653 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 IRAK1P51617 712 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 YWHAEP62258 255 aaKnown RBP15.55■□□□□ 0.08
MBD4-201ENST00000249910 IFFO1Q0D2I5 559 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 KRT71Q3SY84 523 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 FAM182AQ5T1J6 154 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 ZNF410Q86VK4 478 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 GLIS1Q8NBF1 620 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 EXD1Q8NHP7 514 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 GCOM2Q9BZD3 368 aaPredicted RBP15.55■□□□□ 0.08
MBD4-201ENST00000249910 SLC5A4Q9NY91 659 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 PCSK1NQ9UHG2 260 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 NRCAMQ92823 1304 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 TRIP11Q15643 1979 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 TLDC2A0PJX2 215 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 LRRD1A4D1F6 860 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 GRAP2O75791 330 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 KRT1P04264 644 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 MYL3P08590 195 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 NR1D1P20393 614 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 CYP3A5P20815 502 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 PSMA2P25787 234 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 IL1R2P27930 398 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 GNGT1P63211 74 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 RBP5P82980 135 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 MTMR3Q13615 1198 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 ART4Q93070 314 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 TRIM6Q9C030 488 aaPredicted RBP15.55■□□□□ 0.08
MBD4-201ENST00000249910 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 METTL5Q9NRN9 209 aaKnown RBP15.55■□□□□ 0.08
MBD4-201ENST00000249910 C2CD2Q9Y426 696 aa15.55■□□□□ 0.08
MBD4-201ENST00000249910 LAMA2P24043 3122 aaKnown RBP15.55■□□□□ 0.08
MBD4-201ENST00000249910 IVDP26440 423 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 GPD2P43304 727 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 CALCOCO2Q13137 446 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 MFSD10Q14728 455 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 RAB6CQ53S08 254 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 ODF2Q5BJF6 829 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 SH3PXD2AQ5TCZ1 1133 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 SLITRK1Q96PX8 696 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 RAB6CQ9H0N0 254 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 LHX5Q9H2C1 402 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 PABPC3Q9H361 631 aaKnown RBP15.54■□□□□ 0.08
MBD4-201ENST00000249910 DNPEPQ9ULA0 475 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 NOVA2Q9UNW9 492 aaKnown RBP15.54■□□□□ 0.08
MBD4-201ENST00000249910 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.54■□□□□ 0.08
MBD4-201ENST00000249910 PIN4Q9Y237 131 aaKnown RBP15.54■□□□□ 0.08
MBD4-201ENST00000249910 SCN1AP35498 2009 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 RRN3P2A6NIE6 340 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 MED7O43513 233 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 LRCH4O75427 683 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 PAEPP09466 180 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 CHKAP35790 457 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 ADCY8P40145 1251 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 GRM5P41594 1212 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 RGS7P49802 495 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 DYNLT1P63172 113 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 TAF5Q15542 800 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 SLC27A1Q6PCB7 646 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 LRIG3Q6UXM1 1119 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 SESTD1Q86VW0 696 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 XYLT1Q86Y38 959 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 RASAL3Q86YV0 1011 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 ATL2Q8NHH9 583 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 MRPL45Q9BRJ2 306 aaKnown RBP15.54■□□□□ 0.08
MBD4-201ENST00000249910 C10orf88Q9H8K7 445 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 FAM49BQ9NUQ9 324 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 TSPAN16Q9UKR8 245 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 ITGA11Q9UKX5 1188 aa15.54■□□□□ 0.08
MBD4-201ENST00000249910 BARX2Q9UMQ3 279 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms