RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 GATMP50440 423 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 SNX16P57768 344 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 CENPCQ03188 943 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 GFPT1Q06210 699 aaPredicted RBP13.74□□□□□ -0.21
LSM8-201ENST00000249299 KIF5AQ12840 1032 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 MRPL58Q14197 206 aaKnown RBP13.74□□□□□ -0.21
LSM8-201ENST00000249299 TCEAL1Q15170 157 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 TRIP11Q15643 1979 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 CLEC16AQ2KHT3 1053 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 CCDC122Q5T0U0 273 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 KCNT2Q6UVM3 1135 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 H2AFVQ71UI9 128 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 RNF168Q8IYW5 571 aaPredicted RBP13.74□□□□□ -0.21
LSM8-201ENST00000249299 TMEM130Q8N3G9 435 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 B3GALNT2Q8NCR0 500 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 MSANTD4Q8NCY6 345 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 SLC20A1Q8WUM9 679 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 IGSF21Q96ID5 467 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 TWNKQ96RR1 684 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 HNRNPABQ99729 332 aaKnown RBP13.74□□□□□ -0.21
LSM8-201ENST00000249299 PDCL3Q9H2J4 239 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 CYLDQ9NQC7 956 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 SPTLC3Q9NUV7 552 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 MARCH5Q9NX47 278 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 DDX43Q9NXZ2 648 aaKnown RBP13.74□□□□□ -0.21
LSM8-201ENST00000249299 ZMYND8Q9ULU4 1186 aaPredicted RBP13.74□□□□□ -0.21
LSM8-201ENST00000249299 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.74□□□□□ -0.21
LSM8-201ENST00000249299 A0A0A6YYK5 440 aaPredicted RBP13.73□□□□□ -0.21
LSM8-201ENST00000249299 OR6C75A6NL08 312 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 CD19P15391 556 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 SYN1P17600 705 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 PTPN1P18031 435 aaKnown RBP13.73□□□□□ -0.21
LSM8-201ENST00000249299 BRCC3P46736 316 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 PLCB3Q01970 1234 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 DSG2Q14126 1118 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 ZNF394Q53GI3 561 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 OVOS1Q6IE37 1185 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 ACAD10Q6JQN1 1059 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 FUT10Q6P4F1 479 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 FAM171BQ6P995 826 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 ANKS3Q6ZW76 656 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 PHF13Q86YI8 300 aaPredicted RBP13.73□□□□□ -0.21
LSM8-201ENST00000249299 SLC39A11Q8N1S5 342 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 FIBCD1Q8N539 461 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 RNF10Q8N5U6 811 aaKnown RBP13.73□□□□□ -0.21
LSM8-201ENST00000249299 TFAP2BQ92481 460 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 NOX5Q96PH1 765 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 SPG21Q9NZD8 308 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 MYO1AQ9UBC5 1043 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 HESX1Q9UBX0 185 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 PUF60Q9UHX1 559 aaKnown RBP13.73□□□□□ -0.21
LSM8-201ENST00000249299 PRG3Q9Y2Y8 225 aaPredicted RBP13.73□□□□□ -0.21
LSM8-201ENST00000249299 REXO2Q9Y3B8 237 aaKnown RBP13.73□□□□□ -0.21
LSM8-201ENST00000249299 PCDHB12Q9Y5F1 795 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 SCN1AP35498 2009 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 ALPK3Q96L96 1907 aa13.73□□□□□ -0.21
LSM8-201ENST00000249299 KIF2AO00139 706 aaPredicted RBP13.72□□□□□ -0.21
LSM8-201ENST00000249299 FTLP02792 175 aaPredicted RBP13.72□□□□□ -0.21
LSM8-201ENST00000249299 ITGB1P05556 798 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 TMEM253P0C7T8 217 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 BRD2P25440 801 aaKnown RBP13.72□□□□□ -0.21
LSM8-201ENST00000249299 LMO2P25791 158 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 NSFP46459 744 aaKnown RBP13.72□□□□□ -0.21
LSM8-201ENST00000249299 SLC8A3P57103 927 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 NOMO3P69849 1222 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 TSPY1Q01534 308 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 CYP27A1Q02318 531 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 IFI16Q16666 785 aaKnown RBP13.72□□□□□ -0.21
LSM8-201ENST00000249299 USP41Q3LFD5 358 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 PAN2Q504Q3 1202 aaKnown RBP13.72□□□□□ -0.21
LSM8-201ENST00000249299 PKDCCQ504Y2 493 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 TAF3Q5VWG9 929 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 KIAA1328Q86T90 577 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 ACOT1Q86TX2 421 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 DCP1BQ8IZD4 617 aaKnown RBP13.72□□□□□ -0.21
LSM8-201ENST00000249299 ANKRD52Q8NB46 1076 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 MYCBPAPQ8TBZ2 947 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 CYFIP2Q96F07 1278 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 PCDHB18PQ96TA0 734 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 SYT15Q9BQS2 421 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 TTPALQ9BTX7 342 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 PLVAPQ9BX97 442 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 UBXN6Q9BZV1 441 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 ACP6Q9NPH0 428 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 CHST7Q9NS84 486 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 SEPT11Q9NVA2 429 aaKnown RBP13.72□□□□□ -0.21
LSM8-201ENST00000249299 CXXC1Q9P0U4 656 aaPredicted RBP13.72□□□□□ -0.21
LSM8-201ENST00000249299 CACNG4Q9UBN1 327 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 HMGXB4Q9UGU5 601 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 SSX2IPQ9Y2D8 614 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 BACE2Q9Y5Z0 518 aa13.72□□□□□ -0.21
LSM8-201ENST00000249299 TDRD15B5MCY1 1934 aaKnown RBP13.72□□□□□ -0.21
LSM8-201ENST00000249299 TBC1D4O60343 1298 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 PDGFRBP09619 1106 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 IGFBP6P24592 240 aaPredicted RBP13.71□□□□□ -0.21
LSM8-201ENST00000249299 GPD2P43304 727 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 BCAT1P54687 386 aa13.71□□□□□ -0.21
LSM8-201ENST00000249299 GSCP56915 257 aaPredicted RBP13.71□□□□□ -0.21
LSM8-201ENST00000249299 CREMQ03060 361 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms