RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 DDX56Q9NY93 547 aaKnown RBP15.15■□□□□ 0.02
HIF3A-202ENST00000244303 A0A0G2JMZ2 1700 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 LRRC37A2A6NM11 1700 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 A0A0G2JLL6 359 aaPredicted RBP15.15■□□□□ 0.02
HIF3A-202ENST00000244303 OGTO15294 1046 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 IFNB1P01574 187 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 ITGAVP06756 1048 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 ELF1P32519 619 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 CDH5P33151 784 aaPredicted RBP15.15■□□□□ 0.02
HIF3A-202ENST00000244303 IREB2P48200 963 aaKnown RBP15.15■□□□□ 0.02
HIF3A-202ENST00000244303 EFNA5P52803 228 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 KCNJ2P63252 427 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 TFAMQ00059 246 aaKnown RBP15.15■□□□□ 0.02
HIF3A-202ENST00000244303 IL9RQ01113 521 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 TAP1Q03518 808 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 MGAT5Q09328 741 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 BNIP1Q12981 228 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 TRPC3Q13507 836 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 E2F5Q15329 346 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 CCDC142Q17RM4 750 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 FAM160B1Q5W0V3 765 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 FAM47EQ6ZV65 393 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 PRRT2Q7Z6L0 340 aaPredicted RBP15.15■□□□□ 0.02
HIF3A-202ENST00000244303 PNMA8AQ86V59 439 aaPredicted RBP15.15■□□□□ 0.02
HIF3A-202ENST00000244303 NIPA2Q8N8Q9 360 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 GBP7Q8N8V2 638 aaPredicted RBP15.15■□□□□ 0.02
HIF3A-202ENST00000244303 MAGEC3Q8TD91 643 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 ZNF518BQ9C0D4 1074 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 R3HDMLQ9H3Y0 253 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 VPS37BQ9H9H4 285 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 NOD2Q9HC29 1040 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 BAIAP2L1Q9UHR4 511 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 PNMA3Q9UL41 463 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 PCDHGC3Q9UN70 934 aa15.15■□□□□ 0.02
HIF3A-202ENST00000244303 PRKCBP05771 671 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 EIF4BP23588 611 aaKnown RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 MARK3P27448 753 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 ASPAP45381 313 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 NR1H3Q13133 447 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 ZNF699Q32M78 642 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 EEPD1Q7L9B9 569 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 TDRPQ86YL5 185 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 NKD2Q969F2 451 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 CLMNQ96JQ2 1002 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 PLCD4Q9BRC7 762 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 ASCC2Q9H1I8 757 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 PCDH9Q9HC56 1237 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 SAE1Q9UBE0 346 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 TJP2Q9UDY2 1190 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 CPSF3Q9UKF6 684 aaKnown RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 CEP83Q9Y592 693 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 C3orf70A6NLC5 250 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 GOLGA8SH3BPF8 625 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 GOLGA8MH3BSY2 632 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 ABLIM1O14639 778 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 HGSO14964 777 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 BANF1O75531 89 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 CNMDO75829 334 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 ASMTLO95671 621 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 HOXC6P09630 235 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 NQO1P15559 274 aaKnown RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 RFC1P35251 1148 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 DYNLT1P63172 113 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 LAMTOR4Q0VGL1 99 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 PDIA2Q13087 525 aaKnown RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 PKN2Q16513 984 aaKnown RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 SMTNL2Q2TAL5 461 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 WLSQ5T9L3 541 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 CDCA2Q69YH5 1023 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 LRRC71Q8N4P6 559 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 RNF149Q8NC42 400 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 PRCCQ92733 491 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 MRRFQ96E11 262 aaKnown RBP15.14■□□□□ 0.01
HIF3A-202ENST00000244303 PITPNM3Q9BZ71 974 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 TRABDQ9H4I3 376 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 ZWILCHQ9H900 591 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 RXFP1Q9HBX9 757 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 KLHL14Q9P2G3 628 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 SUFUQ9UMX1 484 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 SBF1O95248 1867 aa15.14■□□□□ 0.01
HIF3A-202ENST00000244303 ALOX15BO15296 676 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 KRT15P19012 456 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 PSMA2P25787 234 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 SLC8A1P32418 973 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 OSTNP61366 133 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 LY6KQ17RY6 165 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 PTPN20Q4JDL3 420 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 DENND1BQ6P3S1 775 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 MOB2Q70IA6 237 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 CENPUQ71F23 418 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 C4orf33Q8N1A6 199 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 JOSD2Q8TAC2 188 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 SLC35B2Q8TB61 432 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 XYLT2Q9H1B5 865 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 C10orf88Q9H8K7 445 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 UBN1Q9NPG3 1134 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 RNF181Q9P0P0 153 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 AGTPBP1Q9UPW5 1226 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 SHOC2Q9UQ13 582 aa15.13■□□□□ 0.01
HIF3A-202ENST00000244303 PAPPA2Q9BXP8 1791 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms