RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 GOLGA6CA6NDK9 693 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 DCAF8L1A6NGE4 600 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 GOLGA6DP0CG33 693 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 HSD17B3P37058 310 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 LCLAT1Q6UWP7 414 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 CPXM1Q96SM3 734 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 GOLGA6AQ9NYA3 693 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 MTRF1LQ9UGC7 380 aaKnown RBP24.57■■□□□ 1.52
MSX2-201ENST00000239243 SNX24Q9Y343 169 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 TRIP11Q15643 1979 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 CYBAP13498 195 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 GJC1P36383 396 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 GPD2P43304 727 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 PDCLQ13371 301 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 PPP1R7Q15435 360 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 XYLT1Q86Y38 959 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 PIK3R5Q8WYR1 880 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 TUBGCP4Q9UGJ1 667 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 ABT1Q9ULW3 272 aaKnown RBP24.57■■□□□ 1.52
MSX2-201ENST00000239243 SNX9Q9Y5X1 595 aa24.57■■□□□ 1.52
MSX2-201ENST00000239243 F8VP50 259 aa24.56■■□□□ 1.52
MSX2-201ENST00000239243 GOLGA8SH3BPF8 625 aa24.56■■□□□ 1.52
MSX2-201ENST00000239243 GAS8O95995 478 aa24.56■■□□□ 1.52
MSX2-201ENST00000239243 CTGFP29279 349 aa24.56■■□□□ 1.52
MSX2-201ENST00000239243 OGDHQ02218 1023 aa24.56■■□□□ 1.52
MSX2-201ENST00000239243 NFX1Q12986 1120 aaKnown RBP24.56■■□□□ 1.52
MSX2-201ENST00000239243 ZFYVE27Q5T4F4 411 aa24.56■■□□□ 1.52
MSX2-201ENST00000239243 ZNF771Q7L3S4 317 aaPredicted RBP24.56■■□□□ 1.52
MSX2-201ENST00000239243 POLNQ7Z5Q5 900 aa24.56■■□□□ 1.52
MSX2-201ENST00000239243 C1orf54Q8WWF1 131 aa24.56■■□□□ 1.52
MSX2-201ENST00000239243 HHIPL1Q96JK4 782 aa24.56■■□□□ 1.52
MSX2-201ENST00000239243 DCLK3Q9C098 648 aa24.56■■□□□ 1.52
MSX2-201ENST00000239243 TRIP12Q14669 1992 aaPredicted RBP24.56■■□□□ 1.52
MSX2-201ENST00000239243 M0QZ92 97 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 ALDH1A1P00352 501 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 PSMA2P25787 234 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 CCNG2Q16589 344 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 GNASQ5JWF2 1037 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 C9orf57Q5W0N0 161 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 UNC93AQ86WB7 457 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 TRPV1Q8NER1 839 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 ZNF560Q96MR9 790 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 DNAI2Q9GZS0 605 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 PLAAQ9Y263 795 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 PTPN22Q9Y2R2 807 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 PDCD11Q14690 1871 aaKnown RBP24.55■■□□□ 1.52
MSX2-201ENST00000239243 PPFIA2O75334 1257 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 KRT1P04264 644 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 KCNE1P15382 129 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 RFC1P35251 1148 aaPredicted RBP24.55■■□□□ 1.52
MSX2-201ENST00000239243 PNPLA4P41247 253 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 PSMC4P43686 418 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 KCNJ1P48048 391 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 PLTPP55058 493 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 DHX9Q08211 1270 aaKnown RBP24.55■■□□□ 1.52
MSX2-201ENST00000239243 ACAP1Q15027 740 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 XKR4Q5GH76 650 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 ATL2Q8NHH9 583 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 FAM76AQ8TAV0 307 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 MCRS1Q96EZ8 462 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 APOL6Q9BWW8 343 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 GRHL1Q9NZI5 618 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.55■■□□□ 1.52
MSX2-201ENST00000239243 TSPAN16Q9UKR8 245 aa24.55■■□□□ 1.52
MSX2-201ENST00000239243 ERBB2P04626 1255 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 PTPN7P35236 360 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 RPL21P46778 160 aaKnown RBP24.54■■□□□ 1.52
MSX2-201ENST00000239243 LLGL1Q15334 1064 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 GLRA4Q5JXX5 417 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 UBXN11Q5T124 520 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 RSPH3Q86UC2 560 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 UBLCP1Q8WVY7 318 aaPredicted RBP24.54■■□□□ 1.52
MSX2-201ENST00000239243 CHST7Q9NS84 486 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 GOLGA6L10A6NI86 522 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 TJP3O95049 919 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 RPLP2P05387 115 aaKnown RBP24.54■■□□□ 1.52
MSX2-201ENST00000239243 AKAP5P24588 427 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 CALCOCO2Q13137 446 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 HADHQ16836 314 aaKnown RBP24.54■■□□□ 1.52
MSX2-201ENST00000239243 C18orf25Q96B23 403 aaPredicted RBP24.54■■□□□ 1.52
MSX2-201ENST00000239243 RNF25Q96BH1 459 aaPredicted RBP24.54■■□□□ 1.52
MSX2-201ENST00000239243 SLITRK1Q96PX8 696 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 HERPUD2Q9BSE4 406 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 HEMGNQ9BXL5 484 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 UPF3AQ9H1J1 476 aaKnown RBP24.54■■□□□ 1.52
MSX2-201ENST00000239243 CXCL16Q9H2A7 254 aa24.54■■□□□ 1.52
MSX2-201ENST00000239243 SMIM28A0A1B0GU29 152 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 KRT7P08729 469 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 CYP3A5P20815 502 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 FLT3P36888 993 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 KRT17Q04695 432 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 FBXO47Q5MNV8 452 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 ZDHHC24Q6UX98 284 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 DPH6Q7L8W6 267 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 FBXO25Q8TCJ0 367 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 METTL5Q9NRN9 209 aaKnown RBP24.53■■□□□ 1.52
MSX2-201ENST00000239243 GTF2IRD1Q9UHL9 959 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 MYADML2A6NDP7 307 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 KRT14P02533 472 aa24.53■■□□□ 1.52
MSX2-201ENST00000239243 SETSIPP0DME0 302 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms