RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 CUL1Q13616 776 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 STK11Q15831 433 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 NFE2Q16621 373 aaPredicted RBP5.98□□□□□ -1.45
RFX4-201ENST00000229387 TMEM266Q2M3C6 531 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 FAM122CQ6P4D5 195 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 C4orf50Q6ZRC1 276 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 SEPT12Q8IYM1 358 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 UBR7Q8N806 425 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 ZFRQ96KR1 1074 aaKnown RBP5.98□□□□□ -1.45
RFX4-201ENST00000229387 CEP19Q96LK0 163 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 CALN1Q9BXU9 219 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 OSBPL6Q9BZF3 934 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 ISCUQ9H1K1 167 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 PPCSQ9HAB8 311 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 CD93Q9NPY3 652 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 C8orf4Q9NR00 106 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 IL17RBQ9NRM6 502 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 TBC1D23Q9NUY8 699 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 AIPL1Q9NZN9 384 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 MOSPD1Q9UJG1 213 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 PNMA3Q9UL41 463 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 UTP11Q9Y3A2 253 aaKnown RBP5.98□□□□□ -1.45
RFX4-201ENST00000229387 MYH7BA7E2Y1 1941 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 MYH1P12882 1939 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 MYH8P13535 1937 aa5.98□□□□□ -1.45
RFX4-201ENST00000229387 MACROD2A1Z1Q3 448 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 TEX33O43247 280 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 DKK1O94907 266 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 ESRRBO95718 433 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 GYPCP04921 128 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 TAL1P17542 331 aaPredicted RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 PRKACAP17612 351 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 ATF4P18848 351 aaPredicted RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 TCEA1P23193 301 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 ADSLP30566 484 aaPredicted RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 KRT2P35908 639 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 LONP1P36776 959 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 SP140Q13342 867 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 KCTD2Q14681 263 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 ACAP1Q15027 740 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 ALX1Q15699 326 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 UAP1Q16222 522 aaPredicted RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 TMEM63BQ5T3F8 832 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 LLGL2Q6P1M3 1020 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 RBM44Q6ZP01 1051 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 IDO2Q6ZQW0 420 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 FAM205AQ6ZU69 1335 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 CYP4V2Q6ZWL3 525 aaPredicted RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 ATCAYQ86WG3 371 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 HEATR4Q86WZ0 1026 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 SNX32Q86XE0 403 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 RNF135Q8IUD6 432 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 LRRC47Q8N1G4 583 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 PCYOX1LQ8NBM8 494 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 PNMA1Q8ND90 353 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 PDZD8Q8NEN9 1154 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 FLAD1Q8NFF5 587 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 TTC8Q8TAM2 541 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 TTC9Q92623 222 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 PGM2Q96G03 612 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 MED15Q96RN5 788 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 PSD2Q9BQI7 771 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 MRPL1Q9BYD6 325 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 DNAI2Q9GZS0 605 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 TRIM33Q9UPN9 1127 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 ANGPTL3Q9Y5C1 460 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 CD2APQ9Y5K6 639 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 PARP4Q9UKK3 1724 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 NWD2Q9ULI1 1742 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 PNPLA7Q6ZV29 1317 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 PLSCR1O15162 318 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 NCK2O43639 380 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 CCNT1O60563 726 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 IDEP14735 1019 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 CD44P16070 742 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 PSMA3P25788 255 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 MARK3P27448 753 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 MAN1A1P33908 653 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 HSPA1LP34931 641 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 TSPAN7P41732 249 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 STAT2P52630 851 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 BLVRAP53004 296 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 DAB2P98082 770 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 XIAPP98170 497 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 MFSD14BQ5SR56 506 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 CCNJQ5T5M9 372 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 PRR5LQ6MZQ0 368 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 NEK5Q6P3R8 708 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 POTEGQ6S5H5 508 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 CROCCP2Q86T23 111 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.97□□□□□ -1.45
RFX4-201ENST00000229387 ZNF444Q8N0Y2 327 aaPredicted RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 ADSSL1Q8N142 457 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 USP38Q8NB14 1042 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 EPS8L3Q8TE67 593 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 GRAMD1AQ96CP6 724 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 DYDC2Q96IM9 177 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 METTL2AQ96IZ6 378 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 ECSITQ9BQ95 431 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 TRIM55Q9BYV6 548 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms