RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 CCDC192P0DO97 292 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 SCP2P22307 547 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 MPLP40238 635 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 ATP2C1P98194 919 aaPredicted RBP12.52□□□□□ -0.41
FRG1-201ENST00000226798 RUNX3Q13761 415 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 PTPAQ15257 358 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 ZRSR1Q15695 479 aaKnown RBP12.52□□□□□ -0.41
FRG1-201ENST00000226798 MGAT5BQ3V5L5 792 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 TMEM119Q4V9L6 283 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 SLC39A4Q6P5W5 647 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 CD302Q8IX05 232 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 CAMKK1Q8N5S9 505 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 FAM184AQ8NB25 1140 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 RIN3Q8TB24 985 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 C2orf15Q8WU43 125 aaKnown RBP12.52□□□□□ -0.41
FRG1-201ENST00000226798 LSM14BQ9BX40 385 aaKnown RBP12.52□□□□□ -0.41
FRG1-201ENST00000226798 GKN1Q9NS71 199 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 DSEQ9UL01 958 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 ODF2LQ9ULJ1 636 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 TBX20Q9UMR3 447 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 DERAQ9Y315 318 aa12.52□□□□□ -0.41
FRG1-201ENST00000226798 SMG1Q96Q15 3661 aaKnown RBP12.52□□□□□ -0.41
FRG1-201ENST00000226798 RNF40O75150 1001 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 KCNK5O95279 499 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 EGFP01133 1207 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 HMGA1P17096 107 aaKnown RBP12.51□□□□□ -0.41
FRG1-201ENST00000226798 NMT1P30419 496 aaKnown RBP12.51□□□□□ -0.41
FRG1-201ENST00000226798 ZNF131P52739 623 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 NLRP12P59046 1061 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 GRSF1Q12849 480 aaKnown RBP eCLIP12.51□□□□□ -0.41
FRG1-201ENST00000226798 TMEM132DQ14C87 1099 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 PLK5Q496M5 336 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 TRIM68Q6AZZ1 485 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 LRRTM3Q86VH5 581 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 SPPL2BQ8TCT7 592 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 USP13Q92995 863 aaPredicted RBP12.51□□□□□ -0.41
FRG1-201ENST00000226798 PLIN2Q99541 437 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 REEP2Q9BRK0 252 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 MSTO1Q9BUK6 570 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 CCSER1Q9C0I3 900 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 SMOC1Q9H4F8 434 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 EBF3Q9H4W6 596 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 KIF9Q9HAQ2 790 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 VPS45Q9NRW7 570 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 POLR3BQ9NW08 1133 aaPredicted RBP12.51□□□□□ -0.41
FRG1-201ENST00000226798 SLC8A2Q9UPR5 921 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 C2CD2Q9Y426 696 aa12.51□□□□□ -0.41
FRG1-201ENST00000226798 PTPRDP23468 1912 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.5□□□□□ -0.41
FRG1-201ENST00000226798 SOBPA7XYQ1 873 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 K7ENM7 598 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 F11P03951 625 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 HAPLN1P10915 354 aaPredicted RBP12.5□□□□□ -0.41
FRG1-201ENST00000226798 ARSAP15289 507 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 DRD1P21728 446 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 DDX6P26196 483 aaKnown RBP eCLIP12.5□□□□□ -0.41
FRG1-201ENST00000226798 AVPR1AP37288 418 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 CDR1P51861 262 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 SMARCB1Q12824 385 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 TCEAL6Q6IPX3 200 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 MAB21L3Q8N8X9 362 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 GIPC2Q8TF65 315 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 LRRC15Q8TF66 581 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 EZH1Q92800 747 aaPredicted RBP12.5□□□□□ -0.41
FRG1-201ENST00000226798 TCEAL3Q969E4 200 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 RNF25Q96BH1 459 aaPredicted RBP12.5□□□□□ -0.41
FRG1-201ENST00000226798 HHIPQ96QV1 700 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 FIZ1Q96SL8 496 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 DUSP15Q9H1R2 295 aaPredicted RBP12.5□□□□□ -0.41
FRG1-201ENST00000226798 FBRSL1Q9HCM7 1045 aaKnown RBP12.5□□□□□ -0.41
FRG1-201ENST00000226798 SH2B1Q9NRF2 756 aaPredicted RBP12.5□□□□□ -0.41
FRG1-201ENST00000226798 TDP1Q9NUW8 608 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 ABCA7Q8IZY2 2146 aa12.5□□□□□ -0.41
FRG1-201ENST00000226798 THADAQ6YHU6 1953 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 TNRC6BQ9UPQ9 1833 aaKnown RBP12.49□□□□□ -0.41
FRG1-201ENST00000226798 VWA3AA6NCI4 1184 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 CYB561D2O14569 222 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 TADA3O75528 432 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 PROS1P07225 676 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 TAF6P49848 677 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 BFSP1Q12934 665 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 ZNF268Q14587 947 aaPredicted RBP12.49□□□□□ -0.41
FRG1-201ENST00000226798 KARSQ15046 597 aaKnown RBP12.49□□□□□ -0.41
FRG1-201ENST00000226798 TAF12Q16514 161 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 RILPL1Q5EBL4 403 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 WSCD1Q658N2 575 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 RNF43Q68DV7 783 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 NAIF1Q69YI7 327 aaPredicted RBP12.49□□□□□ -0.41
FRG1-201ENST00000226798 SYT13Q7L8C5 426 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 CDK5RAP3Q96JB5 506 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 ZSCAN31Q96LW9 406 aaPredicted RBP12.49□□□□□ -0.41
FRG1-201ENST00000226798 ASB7Q9H672 318 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 PARVGQ9HBI0 331 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 ABI2Q9NYB9 513 aaPredicted RBP12.49□□□□□ -0.41
FRG1-201ENST00000226798 EBF1Q9UH73 591 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 CELSR3Q9NYQ7 3312 aa12.49□□□□□ -0.41
FRG1-201ENST00000226798 FASNP49327 2511 aaKnown RBP12.48□□□□□ -0.41
FRG1-201ENST00000226798 SLC26A4O43511 780 aa12.48□□□□□ -0.41
FRG1-201ENST00000226798 EIF5BO60841 1220 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms