RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 KSR1Q8IVT5 923 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 ARHGAP24Q8N264 748 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 STARD8Q92502 1023 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 SLC35C1Q96A29 364 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 LXNQ9BS40 222 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 EBF3Q9H4W6 596 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 IQCA1LA6NCM1 817 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 GOLGA8TH3BQL2 631 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 ZBED1O96006 694 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 UCHL3P15374 230 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 TKTP29401 623 aaKnown RBP14.3□□□□□ -0.12
GABPB1-201ENST00000220429 CDC16Q13042 620 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 MSLNQ13421 630 aaPredicted RBP14.3□□□□□ -0.12
GABPB1-201ENST00000220429 EXOC3L4Q17RC7 722 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 KCTD21Q4G0X4 260 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 SPDYAQ5MJ70 313 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 SEMA4AQ9H3S1 761 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 PIM2Q9P1W9 311 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 DOLKQ9UPQ8 538 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 STXBP5LQ9Y2K9 1186 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 NR2E3Q9Y5X4 410 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 BRCA1P38398 1863 aaKnown RBP14.3□□□□□ -0.12
GABPB1-201ENST00000220429 A0A087X0T9 212 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 DDX39AO00148 427 aaKnown RBP14.3□□□□□ -0.12
GABPB1-201ENST00000220429 NDC80O14777 642 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 DKC1O60832 514 aaKnown RBP eCLIP14.3□□□□□ -0.12
GABPB1-201ENST00000220429 FAM228BP0C875 321 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 KLHL30Q0D2K2 578 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 MED21Q13503 144 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 ASIC2Q16515 512 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 SLC18A3Q16572 532 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 SLC16A10Q8TF71 515 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 RIT2Q99578 217 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 HGH1Q9BTY7 390 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 PKD2L1Q9P0L9 805 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 SCHIP1Q9P0W5 487 aaPredicted RBP14.3□□□□□ -0.12
GABPB1-201ENST00000220429 STARD13Q9Y3M8 1113 aa14.3□□□□□ -0.12
GABPB1-201ENST00000220429 GSC2O15499 205 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 CCDC22O60826 627 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 TAC1P20366 129 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 BAG6P46379 1132 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 RPL5P46777 297 aaKnown RBP14.29□□□□□ -0.12
GABPB1-201ENST00000220429 COG2Q14746 738 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 TAF1BQ53T94 588 aaPredicted RBP14.29□□□□□ -0.12
GABPB1-201ENST00000220429 ZNF720Q7Z2F6 126 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 IRF2BP2Q7Z5L9 587 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 PHLDB2Q86SQ0 1253 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 COX4I2Q96KJ9 171 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 NSMCE3Q96MG7 304 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 KCNH7Q9NS40 1196 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 ADAMTS1Q9UHI8 967 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 EXOC3O60645 756 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 PCSK6P29122 969 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 PLTPP55058 493 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 THOC5Q13769 683 aaKnown RBP14.29□□□□□ -0.12
GABPB1-201ENST00000220429 HNRNPDQ14103 355 aaKnown RBP14.29□□□□□ -0.12
GABPB1-201ENST00000220429 NFIL3Q16649 462 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 ZNF423Q2M1K9 1284 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 UBAP2Q5T6F2 1119 aaKnown RBP14.29□□□□□ -0.12
GABPB1-201ENST00000220429 BPHLQ86WA6 291 aaPredicted RBP14.29□□□□□ -0.12
GABPB1-201ENST00000220429 CPXCR1Q8N123 301 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 CCDC127Q96BQ5 260 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 BTBD10Q9BSF8 475 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 FHDC1Q9C0D6 1143 aaPredicted RBP14.29□□□□□ -0.12
GABPB1-201ENST00000220429 SIX2Q9NPC8 291 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 SAR1AQ9NR31 198 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 SEL1LQ9UBV2 794 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 AJAP1Q9UKB5 411 aaPredicted RBP14.29□□□□□ -0.12
GABPB1-201ENST00000220429 PARP14Q460N5 1801 aa14.29□□□□□ -0.12
GABPB1-201ENST00000220429 FUOMA2VDF0 154 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 DHX15O43143 795 aaKnown RBP14.28□□□□□ -0.12
GABPB1-201ENST00000220429 TRMUO75648 421 aaKnown RBP14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ALAS1P13196 640 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 RAB15P59190 212 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 GHRHRQ02643 423 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 TGFBIQ15582 683 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 FAM209AQ5JX71 171 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 C11orf74Q86VG3 221 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 FAM178BQ8IXR5 827 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 JDP2Q8WYK2 163 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 LPAR1Q92633 364 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.28□□□□□ -0.12
GABPB1-201ENST00000220429 RAVER2Q9HCJ3 691 aaKnown RBP14.28□□□□□ -0.12
GABPB1-201ENST00000220429 KCND2Q9NZV8 630 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 DGKIO75912 1065 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ANPEPP15144 967 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 ZNF280AP59817 542 aaPredicted RBP14.28□□□□□ -0.12
GABPB1-201ENST00000220429 MRPS9P82933 396 aaKnown RBP14.28□□□□□ -0.12
GABPB1-201ENST00000220429 POU5F1Q01860 360 aaKnown RBP14.28□□□□□ -0.12
GABPB1-201ENST00000220429 PTK2Q05397 1052 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 MAPK7Q13164 816 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 MPP2Q14168 576 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 CTC1Q2NKJ3 1217 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 DUPD1Q68J44 220 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 CAPN12Q6ZSI9 719 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 DAW1Q8N136 415 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 MCUR1Q96AQ8 359 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 PACSIN1Q9BY11 444 aa14.28□□□□□ -0.12
GABPB1-201ENST00000220429 SLC38A10Q9HBR0 1119 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms