RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 ZNF536O15090 1300 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 CFAP69A5D8W1 941 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 SPATA31C2B4DYI2 1134 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 APOL1O14791 398 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 MAGEB2O15479 319 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 GAS2O43903 313 aaKnown RBP12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 SHOX2O60902 331 aaPredicted RBP12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 STAMBPO95630 424 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 TGFB3P10600 412 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 KCNA2P16389 499 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 CYB5D1Q6P9G0 228 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 ARMCX2Q7L311 632 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 CCDC33Q8N5R6 958 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 GCOM2Q9BZD3 368 aaPredicted RBP12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 ST6GALNAC4Q9H4F1 302 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 RSAD1Q9HA92 442 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 CD248Q9HCU0 757 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 XPNPEP1Q9NQW7 623 aa12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 PPARGC1AQ9UBK2 798 aaKnown RBP12.96□□□□□ -0.33
TM9SF4-201ENST00000217315 CFAP73A6NFT4 308 aa12.96□□□□□ -0.34
TM9SF4-201ENST00000217315 FSCN2O14926 492 aa12.96□□□□□ -0.34
TM9SF4-201ENST00000217315 GJB1P08034 283 aa12.96□□□□□ -0.34
TM9SF4-201ENST00000217315 NOMO3P69849 1222 aa12.96□□□□□ -0.34
TM9SF4-201ENST00000217315 MCL1Q07820 350 aa12.96□□□□□ -0.34
TM9SF4-201ENST00000217315 PPIL6Q8IXY8 311 aa12.96□□□□□ -0.34
TM9SF4-201ENST00000217315 CEP120Q8N960 986 aa12.96□□□□□ -0.34
TM9SF4-201ENST00000217315 PLEKHO2Q8TD55 490 aa12.96□□□□□ -0.34
TM9SF4-201ENST00000217315 SMYD2Q9NRG4 433 aa12.96□□□□□ -0.34
TM9SF4-201ENST00000217315 GPATCH2LQ9NWQ4 482 aa12.96□□□□□ -0.34
TM9SF4-201ENST00000217315 NUDT17P0C025 328 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 ETS1P14921 441 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 GPD1P21695 349 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 PTPN11Q06124 597 aaPredicted RBP12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 NME3Q13232 169 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 DCAF12L1Q5VU92 463 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 ABHD15Q6UXT9 468 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 TRIM42Q8IWZ5 723 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 KCNV2Q8TDN2 545 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 N4BP2L2Q92802 583 aaPredicted RBP12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 LBHD1Q9BQE6 289 aaPredicted RBP12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 ZNF518BQ9C0D4 1074 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 ZC3H7BQ9UGR2 993 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 R3HDM2Q9Y2K5 976 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 DYNC1LI2O43237 492 aaPredicted RBP12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 LSM8O95777 96 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 GH1P01241 217 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 VGLL4Q14135 290 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 BORCS6Q96GS4 357 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 PIN4Q9Y237 131 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 UBOX5O94941 541 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 INSRRP14616 1297 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 ARFIP2P53365 341 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 VCPP55072 806 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 SESN2P58004 480 aaPredicted RBP12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 PTK6Q13882 451 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 ACOT1Q86TX2 421 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 ERO1BQ86YB8 467 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 TRPM4Q8TD43 1214 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 COPS5Q92905 334 aa12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 NOP53Q9NZM5 478 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 KLHL8Q9P2G9 620 aaPredicted RBP12.95□□□□□ -0.34
TM9SF4-201ENST00000217315 PIAS1O75925 651 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 SLC12A2P55011 1212 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 GEN1Q17RS7 908 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 KIZQ2M2Z5 673 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 ERMARDQ5T6L9 678 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 RAPH1Q70E73 1250 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 TTC39CQ8N584 583 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 SCYL1Q96KG9 808 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 ARHGAP28Q9P2N2 729 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 TMEM59LQ9UK28 342 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 UMODL1Q5DID0 1318 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 NAV1Q8NEY1 1877 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 PLCH1Q4KWH8 1693 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 ADM5C9JUS6 153 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 GYG2O15488 501 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 SSTR1P30872 391 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 RFC1P35251 1148 aaPredicted RBP12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 ZNF200P98182 395 aaPredicted RBP12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 AP1B1Q10567 949 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 PTK7Q13308 1070 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 QPCTQ16769 361 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 GOLGA7BQ2TAP0 167 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 RIBC1Q8N443 379 aaPredicted RBP12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 FBXO36Q8NEA4 188 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 ART4Q93070 314 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 MTFR1LQ9H019 292 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 USH1CQ9Y6N9 552 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 IGF2BP3O00425 579 aaKnown RBP eCLIP12.94□□□□□ -0.343e-8■■■■□ 22.7
TM9SF4-201ENST00000217315 HAUS5O94927 633 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 GARSP41250 739 aaKnown RBP12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 OVGP1Q12889 678 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 DSTYKQ6XUX3 929 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 KATNAL2Q8IYT4 538 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 ASCC2Q9H1I8 757 aaPredicted RBP12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 SPC25Q9HBM1 224 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 UBN1Q9NPG3 1134 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 USP18Q9UMW8 372 aa12.94□□□□□ -0.34
TM9SF4-201ENST00000217315 ACKR2O00590 384 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms