RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 WDR44Q5JSH3 913 aa10.17□□□□□ -0.78
TUBB1-201ENST00000217133 FAM102BQ5T8I3 360 aa10.17□□□□□ -0.78
TUBB1-201ENST00000217133 TTC7BQ86TV6 843 aa10.17□□□□□ -0.78
TUBB1-201ENST00000217133 RHPN2Q8IUC4 686 aa10.17□□□□□ -0.78
TUBB1-201ENST00000217133 C12orf56Q8IXR9 622 aa10.17□□□□□ -0.78
TUBB1-201ENST00000217133 SMC1BQ8NDV3 1235 aa10.17□□□□□ -0.78
TUBB1-201ENST00000217133 GATA6Q92908 595 aa10.17□□□□□ -0.78
TUBB1-201ENST00000217133 ALKBH8Q96BT7 664 aaKnown RBP10.17□□□□□ -0.78
TUBB1-201ENST00000217133 DTNBP1Q96EV8 351 aa10.17□□□□□ -0.78
TUBB1-201ENST00000217133 PRR11Q96HE9 360 aaPredicted RBP10.17□□□□□ -0.78
TUBB1-201ENST00000217133 STRA6Q9BX79 667 aa10.17□□□□□ -0.78
TUBB1-201ENST00000217133 ASCC2Q9H1I8 757 aaPredicted RBP10.17□□□□□ -0.78
TUBB1-201ENST00000217133 MMADHCQ9H3L0 296 aaPredicted RBP10.17□□□□□ -0.78
TUBB1-201ENST00000217133 GINM1Q9NU53 330 aa10.17□□□□□ -0.78
TUBB1-201ENST00000217133 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.17□□□□□ -0.78
TUBB1-201ENST00000217133 ATRNL1Q5VV63 1379 aa10.17□□□□□ -0.78
TUBB1-201ENST00000217133 NDC80O14777 642 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 GRIN3BO60391 1043 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 BGNP21810 368 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 ARL4CP56559 192 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 BPIFB4P59827 614 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 AP2B1P63010 937 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 EFHC2Q5JST6 749 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 C1orf146Q5VVC0 180 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 ARMC3Q5W041 872 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 SV2AQ7L0J3 742 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.16□□□□□ -0.78
TUBB1-201ENST00000217133 SPIRE2Q8WWL2 714 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 IFT43Q96FT9 208 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 OXNAD1Q96HP4 312 aaPredicted RBP10.16□□□□□ -0.78
TUBB1-201ENST00000217133 FAM111AQ96PZ2 611 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 NR1H4Q96RI1 486 aaPredicted RBP10.16□□□□□ -0.78
TUBB1-201ENST00000217133 GPRC5CQ9NQ84 441 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 KRT82Q9NSB4 513 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 PRR12Q9ULL5 1215 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 SHOC2Q9UQ13 582 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 PCDHB2Q9Y5E7 798 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.16□□□□□ -0.78
TUBB1-201ENST00000217133 PCNTO95613 3336 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 I3L4J1 428 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 UNGP13051 313 aaPredicted RBP10.16□□□□□ -0.78
TUBB1-201ENST00000217133 ADSSP30520 456 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 KDSRQ06136 332 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 MCL1Q07820 350 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 FAM43BQ6ZT52 329 aaPredicted RBP10.16□□□□□ -0.78
TUBB1-201ENST00000217133 TMEM179Q6ZVK1 233 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 SESTD1Q86VW0 696 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 KBTBD2Q8IY47 623 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 ST13P4Q8IZP2 240 aaPredicted RBP10.16□□□□□ -0.78
TUBB1-201ENST00000217133 OGFOD1Q8N543 542 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 POMGNT1Q8WZA1 660 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 PTPRN2Q92932 1015 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 TMEM121Q9BTD3 319 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 THTPAQ9BU02 230 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 MYH11P35749 1972 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 SMAPO00193 183 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 MFSD7Q6UXD7 560 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 RCOR2Q8IZ40 523 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 ALLCQ8N6M5 410 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 FAM84AQ96KN4 292 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 SSU72Q9NP77 194 aaKnown RBP10.16□□□□□ -0.78
TUBB1-201ENST00000217133 PI4KBQ9UBF8 816 aa10.16□□□□□ -0.78
TUBB1-201ENST00000217133 UMODL1Q5DID0 1318 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 NRXN2Q9P2S2 1712 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 SPECC1L-ADORA2AF8WAN1 911 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 PYGLP06737 847 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 P4HBP07237 508 aaKnown RBP10.15□□□□□ -0.78
TUBB1-201ENST00000217133 INHBAP08476 426 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 MAPTP10636 758 aaKnown RBP10.15□□□□□ -0.78
TUBB1-201ENST00000217133 RARBP10826 455 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 ANPEPP15144 967 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 GLRA2P23416 452 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 DYNLT1P63172 113 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 WDR72Q3MJ13 1102 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 ENOSF1Q7L5Y1 443 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 NLRX1Q86UT6 975 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 SCUBE1Q8IWY4 988 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 FAM81AQ8TBF8 368 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 ACSF2Q96CM8 615 aaPredicted RBP10.15□□□□□ -0.78
TUBB1-201ENST00000217133 NDNQ99608 321 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 NMUR2Q9GZQ4 415 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 SCINQ9Y6U3 715 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 IQANK1A0A1B0GTG1 560 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 FAM237BA0A1B0GVD1 139 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 PMM2O15305 246 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 KRT72Q14CN4 511 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 CNPY1Q3B7I2 92 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 RNASEH2BQ5TBB1 312 aaKnown RBP10.15□□□□□ -0.78
TUBB1-201ENST00000217133 DCUN1D2Q6PH85 259 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 TMPRSS6Q8IU80 811 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 RTKN2Q8IZC4 609 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 OPTNQ96CV9 577 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 MTBPQ96DY7 904 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 RILPQ96NA2 401 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 RABGEF1Q9UJ41 708 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 AGTPBP1Q9UPW5 1226 aa10.15□□□□□ -0.78
TUBB1-201ENST00000217133 MYPNQ86TC9 1320 aa10.15□□□□□ -0.79
TUBB1-201ENST00000217133 ARHGAP42A6NI28 874 aa10.15□□□□□ -0.79
TUBB1-201ENST00000217133 STAT2P52630 851 aa10.15□□□□□ -0.79
TUBB1-201ENST00000217133 VCPP55072 806 aaKnown RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms