RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 MSANTD3Q96H12 275 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 IER2Q9BTL4 223 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 SLC46A2Q9BY10 475 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 MTMR12Q9C0I1 747 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 EPC1Q9H2F5 836 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 TMEM206Q9H813 350 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 DDX43Q9NXZ2 648 aaKnown RBP16.13■□□□□ 0.17
UPK3A-201ENST00000216211 TFIP11Q9UBB9 837 aaKnown RBP16.13■□□□□ 0.17
UPK3A-201ENST00000216211 ITGA11Q9UKX5 1188 aa16.13■□□□□ 0.17
UPK3A-201ENST00000216211 SMG5Q9UPR3 1016 aaKnown RBP16.13■□□□□ 0.17
UPK3A-201ENST00000216211 HELZP42694 1942 aaKnown RBP16.13■□□□□ 0.17
UPK3A-201ENST00000216211 MYBPHLA2RUH7 354 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 SPECC1L-ADORA2AF8WAN1 911 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 SPTLC2O15270 562 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 F11P03951 625 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 TMEM191BP0C7N4 346 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 HMGA1P17096 107 aaKnown RBP16.12■□□□□ 0.17
UPK3A-201ENST00000216211 CTHP32929 405 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 CCR3P51677 355 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 SATB1Q01826 763 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 TNK2Q07912 1038 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 WDR44Q5JSH3 913 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 ERMP1Q7Z2K6 904 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 TMEM150AQ86TG1 271 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 OSTM1Q86WC4 334 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 LRRC52Q8N7C0 313 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 ACBD6Q9BR61 282 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 FAM126AQ9BYI3 521 aaPredicted RBP16.12■□□□□ 0.17
UPK3A-201ENST00000216211 SIX4Q9UIU6 781 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 MAGED2Q9UNF1 606 aaPredicted RBP16.12■□□□□ 0.17
UPK3A-201ENST00000216211 SNX9Q9Y5X1 595 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 ATG2BQ96BY7 2078 aa16.12■□□□□ 0.17
UPK3A-201ENST00000216211 RALGAPA1Q6GYQ0 2036 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 HCRTO43612 131 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 CYP2F1P24903 491 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 NRLP54845 237 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 NLRP12P59046 1061 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 NUCB2P80303 420 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 RBP5P82980 135 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 MYL7Q01449 175 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 LRRC32Q14392 662 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 PPP2R5DQ14738 602 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 PON2Q15165 354 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 E2F4Q16254 413 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 NFE2Q16621 373 aaPredicted RBP16.11■□□□□ 0.17
UPK3A-201ENST00000216211 DDR2Q16832 855 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 CCDC142Q17RM4 750 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 INTS6LQ5JSJ4 861 aaKnown RBP16.11■□□□□ 0.17
UPK3A-201ENST00000216211 FOXD4L5Q5VV16 416 aaPredicted RBP16.11■□□□□ 0.17
UPK3A-201ENST00000216211 C1orf228Q6PIY5 440 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 MAMSTRQ6ZN01 415 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 Q6ZS52 159 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 RALGPS2Q86X27 583 aaPredicted RBP16.11■□□□□ 0.17
UPK3A-201ENST00000216211 CMTM8Q8IZV2 173 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 TMEM86AQ8N2M4 240 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 CELF5Q8N6W0 485 aaKnown RBP16.11■□□□□ 0.17
UPK3A-201ENST00000216211 MAB21L3Q8N8X9 362 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 LEO1Q8WVC0 666 aaPredicted RBP16.11■□□□□ 0.17
UPK3A-201ENST00000216211 FOXD4L4Q8WXT5 416 aaPredicted RBP16.11■□□□□ 0.17
UPK3A-201ENST00000216211 DHX58Q96C10 678 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 ANKRD36BP1Q96IX9 119 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 TNMDQ9H2S6 317 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 KBTBD4Q9NVX7 518 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 GDAP2Q9NXN4 497 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 GTF3C4Q9UKN8 822 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 PTPRJQ12913 1337 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 GPR179Q6PRD1 2367 aa16.11■□□□□ 0.17
UPK3A-201ENST00000216211 PPP6R2O75170 966 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 CSH1P0DML2 217 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 CSH2P0DML3 217 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 HOXD13P35453 343 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 AVPR1AP37288 418 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 CXCL12P48061 93 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 TXNDC8Q6A555 127 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 STXBP4Q6ZWJ1 553 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 CBWD2Q8IUF1 395 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 ADGRF2Q8IZF7 708 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 SPEM1Q8N4L4 309 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 OR5B17Q8NGF7 314 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 ZNF396Q96N95 335 aaPredicted RBP16.1■□□□□ 0.17
UPK3A-201ENST00000216211 PKMYT1Q99640 499 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 TRIM9Q9C026 710 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 LRRC27Q9C0I9 530 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 GKN1Q9NS71 199 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 INTS13Q9NVM9 706 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 THG1LQ9NWX6 298 aaKnown RBP16.1■□□□□ 0.17
UPK3A-201ENST00000216211 CCL26Q9Y258 94 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 MYO16Q9Y6X6 1858 aa16.1■□□□□ 0.17
UPK3A-201ENST00000216211 ZNF233A6NK53 670 aa16.09■□□□□ 0.17
UPK3A-201ENST00000216211 KIAA0391O15091 583 aaKnown RBP16.09■□□□□ 0.17
UPK3A-201ENST00000216211 DDX6P26196 483 aaKnown RBP eCLIP16.09■□□□□ 0.17
UPK3A-201ENST00000216211 RPL10AP62906 217 aaKnown RBP16.09■□□□□ 0.17
UPK3A-201ENST00000216211 ASIC1P78348 528 aa16.09■□□□□ 0.17
UPK3A-201ENST00000216211 DMWDQ09019 674 aa16.09■□□□□ 0.17
UPK3A-201ENST00000216211 LPAL2Q16609 132 aa16.09■□□□□ 0.17
UPK3A-201ENST00000216211 SOWAHAQ2M3V2 549 aa16.09■□□□□ 0.17
UPK3A-201ENST00000216211 ITPRIPL2Q3MIP1 535 aa16.09■□□□□ 0.17
UPK3A-201ENST00000216211 DGKKQ5KSL6 1271 aa16.09■□□□□ 0.17
UPK3A-201ENST00000216211 TOP6BLQ8N6T0 577 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms