RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 LRRC43Q8N309 656 aa13.06□□□□□ -0.32
SNU13-201ENST00000215956 SEMA4DQ92854 862 aa13.06□□□□□ -0.32
SNU13-201ENST00000215956 ZNF558Q96NG5 402 aa13.06□□□□□ -0.32
SNU13-201ENST00000215956 CASD1Q96PB1 797 aa13.06□□□□□ -0.32
SNU13-201ENST00000215956 PPP1R16BQ96T49 567 aa13.06□□□□□ -0.32
SNU13-201ENST00000215956 OSMRQ99650 979 aa13.06□□□□□ -0.32
SNU13-201ENST00000215956 AGPAT1Q99943 283 aa13.06□□□□□ -0.32
SNU13-201ENST00000215956 GPR88Q9GZN0 384 aa13.06□□□□□ -0.32
SNU13-201ENST00000215956 LACRTQ9GZZ8 138 aa13.06□□□□□ -0.32
SNU13-201ENST00000215956 TOPORSQ9NS56 1045 aaPredicted RBP13.06□□□□□ -0.32
SNU13-201ENST00000215956 CDC23Q9UJX2 597 aa13.06□□□□□ -0.32
SNU13-201ENST00000215956 AJAP1Q9UKB5 411 aaPredicted RBP13.06□□□□□ -0.32
SNU13-201ENST00000215956 MRFAP1Q9Y605 127 aa13.06□□□□□ -0.32
SNU13-201ENST00000215956 MACROD2A1Z1Q3 448 aa13.05□□□□□ -0.32
SNU13-201ENST00000215956 HOXA2O43364 376 aa13.05□□□□□ -0.32
SNU13-201ENST00000215956 FAM189A1O60320 539 aa13.05□□□□□ -0.32
SNU13-201ENST00000215956 LRRN2O75325 713 aa13.05□□□□□ -0.32
SNU13-201ENST00000215956 USP8P40818 1118 aa13.05□□□□□ -0.32
SNU13-201ENST00000215956 CKAP4Q07065 602 aaKnown RBP13.05□□□□□ -0.32
SNU13-201ENST00000215956 NCOA4Q13772 614 aa13.05□□□□□ -0.32
SNU13-201ENST00000215956 KIZQ2M2Z5 673 aa13.05□□□□□ -0.32
SNU13-201ENST00000215956 SGSM1Q2NKQ1 1148 aa13.05□□□□□ -0.32
SNU13-201ENST00000215956 CWF19L1Q69YN2 538 aaKnown RBP13.05□□□□□ -0.32
SNU13-201ENST00000215956 ZDHHC14Q8IZN3 488 aa13.05□□□□□ -0.32
SNU13-201ENST00000215956 TSPAN18Q96SJ8 248 aa13.05□□□□□ -0.32
SNU13-201ENST00000215956 CCDC94Q9BW85 323 aaPredicted RBP13.05□□□□□ -0.32
SNU13-201ENST00000215956 RNF19AQ9NV58 838 aa13.05□□□□□ -0.32
SNU13-201ENST00000215956 CACNA1BQ00975 2339 aa13.05□□□□□ -0.32
SNU13-201ENST00000215956 A0A1B0GUA9 196 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 C2orf71A6NGG8 1288 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 EDN1P05305 212 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 WEE2P0C1S8 567 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 CRYBB1P53674 252 aaPredicted RBP13.04□□□□□ -0.32
SNU13-201ENST00000215956 DSC3Q14574 896 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 AMHR2Q16671 573 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 RARS2Q5T160 578 aaKnown RBP13.04□□□□□ -0.32
SNU13-201ENST00000215956 KIAA1841Q6NSI8 718 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 NOTUMQ6P988 496 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 ABI1Q8IZP0 508 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 SYCE1Q8N0S2 351 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 MRPL43Q8N983 215 aaKnown RBP13.04□□□□□ -0.32
SNU13-201ENST00000215956 FLCNQ8NFG4 579 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 SLC30A5Q8TAD4 765 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 CTNNBL1Q8WYA6 563 aaPredicted RBP13.04□□□□□ -0.32
SNU13-201ENST00000215956 ZNF516Q92618 1163 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 FAM212AQ96EL1 285 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 ADAMTS10Q9H324 1103 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 PDZD7Q9H5P4 517 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 PLEKHA5Q9HAU0 1116 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 SPG21Q9NZD8 308 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 LIMD1Q9UGP4 676 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 NENFQ9UMX5 172 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 C2orf16Q68DN1 1984 aa13.04□□□□□ -0.32
SNU13-201ENST00000215956 RCCD1A6NED2 376 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 DDX3XO00571 662 aaKnown RBP eCLIP13.03□□□□□ -0.324e-19■■■□□ 17.8
SNU13-201ENST00000215956 B4GALT5O43286 388 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 TSPAN1O60635 241 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 CLASP2O75122 1294 aaKnown RBP13.03□□□□□ -0.32
SNU13-201ENST00000215956 CLSTN1O94985 981 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 TMEM253P0C7T8 217 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 GZMAP12544 262 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 PRLRP16471 622 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 ARF4P18085 180 aaPredicted RBP13.03□□□□□ -0.32
SNU13-201ENST00000215956 ATICP31939 592 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 GRM5P41594 1212 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 NOP14P78316 857 aaKnown RBP13.03□□□□□ -0.32
SNU13-201ENST00000215956 CUL2Q13617 745 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 PAPD7Q5XG87 772 aaKnown RBP13.03□□□□□ -0.32
SNU13-201ENST00000215956 EEF1DP3Q658K8 133 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 TRIM72Q6ZMU5 477 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 CATSPER4Q7RTX7 472 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 TRAPPC11Q7Z392 1133 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 SLC39A11Q8N1S5 342 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 KREMEN1Q96MU8 473 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 ACAP3Q96P50 834 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 SYT11Q9BT88 431 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 IRX2Q9BZI1 471 aaPredicted RBP13.03□□□□□ -0.32
SNU13-201ENST00000215956 FAM124BQ9H5Z6 455 aaPredicted RBP13.03□□□□□ -0.32
SNU13-201ENST00000215956 MINDY3Q9H8M7 445 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 SEPT11Q9NVA2 429 aaKnown RBP13.03□□□□□ -0.32
SNU13-201ENST00000215956 TRIM10Q9UDY6 481 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 USTQ9Y2C2 406 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 DERAQ9Y315 318 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 PCDHB2Q9Y5E7 798 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 SAR1BQ9Y6B6 198 aa13.03□□□□□ -0.32
SNU13-201ENST00000215956 A0A0U1RQJ8 604 aa13.02□□□□□ -0.32
SNU13-201ENST00000215956 ANKRD62A6NC57 917 aa13.02□□□□□ -0.32
SNU13-201ENST00000215956 EFCAB8A8MWE9 144 aa13.02□□□□□ -0.32
SNU13-201ENST00000215956 KRT5P13647 590 aa13.02□□□□□ -0.32
SNU13-201ENST00000215956 P4HA1P13674 534 aa13.02□□□□□ -0.32
SNU13-201ENST00000215956 DARSP14868 501 aaKnown RBP13.02□□□□□ -0.32
SNU13-201ENST00000215956 TCP1P17987 556 aaKnown RBP13.02□□□□□ -0.32
SNU13-201ENST00000215956 CA8P35219 290 aa13.02□□□□□ -0.32
SNU13-201ENST00000215956 TNFSF9P41273 254 aa13.02□□□□□ -0.32
SNU13-201ENST00000215956 YARSP54577 528 aaKnown RBP13.02□□□□□ -0.32
SNU13-201ENST00000215956 TFAMQ00059 246 aaKnown RBP13.02□□□□□ -0.32
SNU13-201ENST00000215956 ZBTB41Q5SVQ8 909 aa13.02□□□□□ -0.32
SNU13-201ENST00000215956 RHOT2Q8IXI1 618 aa13.02□□□□□ -0.32
SNU13-201ENST00000215956 C12orf76Q8N812 135 aaPredicted RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms