RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 CD302Q8IX05 232 aa14.13□□□□□ -0.15
SF3A1-201ENST00000215793 RFWD2Q8NHY2 731 aa14.13□□□□□ -0.15
SF3A1-201ENST00000215793 ATG4CQ96DT6 458 aa14.13□□□□□ -0.15
SF3A1-201ENST00000215793 SLC7A5P2Q9GIP4 190 aa14.13□□□□□ -0.15
SF3A1-201ENST00000215793 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.13□□□□□ -0.15
SF3A1-201ENST00000215793 TRPC5OSA6NMA1 111 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 BRD2P25440 801 aaKnown RBP14.12□□□□□ -0.15
SF3A1-201ENST00000215793 EPHB2P29323 1055 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 TRPC1P48995 793 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 EN1Q05925 392 aaPredicted RBP14.12□□□□□ -0.15
SF3A1-201ENST00000215793 LRRC74AQ0VAA2 488 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 STYK1Q6J9G0 422 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 NSL1Q96IY1 281 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 DNAJC7Q99615 494 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 GPR63Q9BZJ6 419 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 SLC24A3Q9HC58 644 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 ICAM1P05362 532 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 PRLRP16471 622 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 DAB2IPQ5VWQ8 1189 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 CDR2LQ86X02 465 aaPredicted RBP14.12□□□□□ -0.15
SF3A1-201ENST00000215793 C1orf131Q8NDD1 294 aaKnown RBP14.12□□□□□ -0.15
SF3A1-201ENST00000215793 TFB1MQ8WVM0 346 aaKnown RBP14.12□□□□□ -0.15
SF3A1-201ENST00000215793 PRPF18Q99633 342 aaKnown RBP14.12□□□□□ -0.15
SF3A1-201ENST00000215793 RBBP8Q99708 897 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 FAM118BQ9BPY3 351 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 NAT9Q9BTE0 207 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 THAP2Q9H0W7 228 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 DEFB129Q9H1M3 183 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 SH3BP1Q9Y3L3 701 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 EVPLLA8MZ36 301 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 GOLGA8TH3BQL2 631 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 DAB1O75553 588 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 TMEM62Q0P6H9 643 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 SAMD3Q8N6K7 520 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 AGBL3Q8NEM8 1001 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 ZFYVE28Q9HCC9 887 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.12□□□□□ -0.15
SF3A1-201ENST00000215793 SLC39A10Q9ULF5 831 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 CD163L1Q9NR16 1453 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 TRIM49D1C9J1S8 452 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 EPC2Q52LR7 807 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 SLC25A41Q8N5S1 370 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 TNIP2Q8NFZ5 429 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 DNAJC9Q8WXX5 260 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 OTULINQ96BN8 352 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 TSPOAP1O95153 1857 aa14.12□□□□□ -0.15
SF3A1-201ENST00000215793 A0A087X0T9 212 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 EIF4E1BA6NMX2 242 aaKnown RBP14.11□□□□□ -0.15
SF3A1-201ENST00000215793 FAM228BP0C875 321 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 ERFP50548 548 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 GRIN1Q05586 938 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 STX5Q13190 355 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 PTGISQ16647 500 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 LRRC36Q1X8D7 754 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 SPON1Q9HCB6 807 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 MYOZ2Q9NPC6 264 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 C1orf167Q5SNV9 1468 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 SOAT2O75908 522 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 ITGB3P05106 788 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 SERPIND1P05546 499 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 CETPP11597 493 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 GZMAP12544 262 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 CYP2B6P20813 491 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 PTPAQ15257 358 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 CHI3L2Q15782 390 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 MROH9Q5TGP6 573 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 ANKRD13AQ8IZ07 590 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 C3orf20Q8ND61 904 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 TAAR1Q96RJ0 339 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 HACL1Q9UJ83 578 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 ZNF229Q9UJW7 825 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 CNTNAP4Q9C0A0 1308 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 CHRM3P20309 590 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 HSD17B3P37058 310 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 KBTBD12Q3ZCT8 623 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.11□□□□□ -0.15
SF3A1-201ENST00000215793 HOMEZQ8IX15 550 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 TEX9Q8N6V9 391 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 USP13Q92995 863 aaPredicted RBP14.11□□□□□ -0.15
SF3A1-201ENST00000215793 PHF21AQ96BD5 680 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 PRDM5Q9NQX1 630 aaPredicted RBP14.11□□□□□ -0.15
SF3A1-201ENST00000215793 F9P00740 461 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 S100A5P33763 92 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 TCF7P36402 384 aaPredicted RBP14.11□□□□□ -0.15
SF3A1-201ENST00000215793 CTCFP49711 727 aaPredicted RBP14.11□□□□□ -0.15
SF3A1-201ENST00000215793 CPT1AP50416 773 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 SEC24CP53992 1094 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 GRB10Q13322 594 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 TTLL9Q3SXZ7 439 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 ARID3BQ8IVW6 561 aaPredicted RBP14.11□□□□□ -0.15
SF3A1-201ENST00000215793 BBS7Q8IWZ6 715 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 LINC00116Q8NCU8 138 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 ABHD8Q96I13 439 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 PLEKHA8Q96JA3 519 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 ZNF518BQ9C0D4 1074 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 TMEM39BQ9GZU3 492 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 CLCA2Q9UQC9 943 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 TAF6LQ9Y6J9 622 aa14.11□□□□□ -0.15
SF3A1-201ENST00000215793 ARIH2O95376 493 aa14.1□□□□□ -0.15
SF3A1-201ENST00000215793 PON1P27169 355 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms