RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 CLGNO14967 610 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 LIASO43766 372 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 KIF1CO43896 1103 aaKnown RBP15.86■□□□□ 0.13
EFNB1-201ENST00000204961 ITGBL1O95965 494 aaPredicted RBP15.86■□□□□ 0.13
EFNB1-201ENST00000204961 BACE1P56817 501 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 CYP1B1Q16678 543 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 DARS2Q6PI48 645 aaKnown RBP15.86■□□□□ 0.13
EFNB1-201ENST00000204961 RHBDF2Q6PJF5 856 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 ARMC9Q7Z3E5 817 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 LONP2Q86WA8 852 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 C12orf29Q8N999 325 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 PIWIL1Q96J94 861 aaKnown RBP15.86■□□□□ 0.13
EFNB1-201ENST00000204961 HEXIM2Q96MH2 286 aaKnown RBP15.86■□□□□ 0.13
EFNB1-201ENST00000204961 FAM111AQ96PZ2 611 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 ANKRD31Q8N7Z5 1873 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 TJP3O95049 919 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 ACO1P21399 889 aaKnown RBP15.86■□□□□ 0.13
EFNB1-201ENST00000204961 ATP5DP30049 168 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 TCF7P36402 384 aaPredicted RBP15.86■□□□□ 0.13
EFNB1-201ENST00000204961 GCNT1Q02742 428 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 HIF1AQ16665 826 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 GNPTABQ3T906 1256 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 KIAA0319LQ8IZA0 1049 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 SCYL3Q8IZE3 742 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 ZNF280CQ8ND82 737 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 RFWD2Q8NHY2 731 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 TCP10LQ8TDR4 215 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 ATXN7L3BQ96GX2 97 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 PPP1R12CQ9BZL4 782 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 CYP39A1Q9NYL5 469 aa15.86■□□□□ 0.13
EFNB1-201ENST00000204961 STAT5BP51692 787 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 CRADDP78560 199 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 CCNG2Q16589 344 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 HSDL1Q3SXM5 330 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 ZNF568Q3ZCX4 644 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 XKR3Q5GH77 459 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 OR6B2Q6IFH4 312 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 TTC7BQ86TV6 843 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 HACE1Q8IYU2 909 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 TMC2Q8TDI7 906 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 CFAP57Q96MR6 1250 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 MAPK6Q16659 721 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 APBB1IPQ7Z5R6 666 aaPredicted RBP15.85■□□□□ 0.13
EFNB1-201ENST00000204961 SESTD1Q86VW0 696 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 HIPK4Q8NE63 616 aa15.85■□□□□ 0.13
EFNB1-201ENST00000204961 HCRTO43612 131 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 LGR5O75473 907 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 OATP04181 439 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 RBP3P10745 1247 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 BPIFB4P59827 614 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 CENPCQ03188 943 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 PTPN20Q4JDL3 420 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 FAM102AQ5T9C2 384 aaPredicted RBP15.84■□□□□ 0.13
EFNB1-201ENST00000204961 CASC4Q6P4E1 433 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 ZCCHC23Q6ZST2 131 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 IGDCC3Q8IVU1 814 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 AGR3Q8TD06 166 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 TWNKQ96RR1 684 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 SLC17A6Q9P2U8 582 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 XPO7Q9UIA9 1087 aaKnown RBP15.84■□□□□ 0.13
EFNB1-201ENST00000204961 CHKBQ9Y259 395 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 COQ4Q9Y3A0 265 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 M0QYV0 167 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 SUPT20HL2P0C7V6 817 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 SLC8A1P32418 973 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 PCK1P35558 622 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 CDH6P55285 790 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 SPARCL1Q14515 664 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 SUPT20HL1Q3ZLR7 823 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 GLRA4Q5JXX5 417 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 TREML2Q5T2D2 321 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 ANKLE1Q8NAG6 615 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.84■□□□□ 0.13
EFNB1-201ENST00000204961 ROPN1BQ9BZX4 212 aaPredicted RBP15.84■□□□□ 0.13
EFNB1-201ENST00000204961 SMYD3Q9H7B4 428 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 ROPN1Q9HAT0 212 aaPredicted RBP15.84■□□□□ 0.13
EFNB1-201ENST00000204961 CYTH4Q9UIA0 394 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 SLC12A4Q9UP95 1085 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 ATP2A1O14983 1001 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 MGRN1O60291 552 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 UGT1A9O60656 530 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 RAD23BP54727 409 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 PLCB4Q15147 1175 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 STXBP2Q15833 593 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 CENPUQ71F23 418 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 RTKN2Q8IZC4 609 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 TMEM35BQ8NCS4 154 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 SPATA18Q8TC71 538 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 PTPRN2Q92932 1015 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 CENPTQ96BT3 561 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 TEPSINQ96N21 525 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 UGT1A7Q9HAW7 530 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 UGT1A10Q9HAW8 530 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 UGT1A8Q9HAW9 530 aa15.84■□□□□ 0.13
EFNB1-201ENST00000204961 G3BP2Q9UN86 482 aaKnown RBP15.84■□□□□ 0.13
EFNB1-201ENST00000204961 CITO14578 2027 aa15.83■□□□□ 0.13
EFNB1-201ENST00000204961 ATXN2Q99700 1313 aaKnown RBP15.83■□□□□ 0.13
EFNB1-201ENST00000204961 CYB561D2O14569 222 aa15.83■□□□□ 0.13
EFNB1-201ENST00000204961 DNAJC8O75937 253 aaPredicted RBP15.83■□□□□ 0.13
EFNB1-201ENST00000204961 ITGB3P05106 788 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms