RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 MCM3APO60318 1980 aa13.86□□□□□ -0.19
CTNS-201ENST00000046640 A0A0G2JLL6 359 aaPredicted RBP13.85□□□□□ -0.19
CTNS-201ENST00000046640 TMEM191CA6NGB0 347 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 GOLGA8MH3BSY2 632 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 VTNP04004 478 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 CETPP11597 493 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 STX2P32856 288 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
CTNS-201ENST00000046640 ITIH4Q14624 930 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 SGSM1Q2NKQ1 1148 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 VSTM1Q6UX27 236 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 TRIM72Q6ZMU5 477 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 PRRT2Q7Z6L0 340 aaPredicted RBP13.85□□□□□ -0.19
CTNS-201ENST00000046640 OPTNQ96CV9 577 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 ZNF408Q9H9D4 720 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 CEP350Q5VT06 3117 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 GPR25O00155 361 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 ABLIM1O14639 778 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 PIAS1O75925 651 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 ITIH2P19823 946 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 SLC8A1P32418 973 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 RFC1P35251 1148 aaPredicted RBP13.85□□□□□ -0.19
CTNS-201ENST00000046640 MXD4Q14582 209 aaPredicted RBP13.85□□□□□ -0.19
CTNS-201ENST00000046640 KCNV2Q8TDN2 545 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 NSMCE1Q8WV22 266 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 TGS1Q96RS0 853 aaKnown RBP13.85□□□□□ -0.19
CTNS-201ENST00000046640 STMN4Q9H169 189 aaPredicted RBP13.85□□□□□ -0.19
CTNS-201ENST00000046640 ADARB2Q9NS39 739 aaKnown RBP13.85□□□□□ -0.19
CTNS-201ENST00000046640 WHRNQ9P202 907 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 PCSK1NQ9UHG2 260 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 IP6K2Q9UHH9 426 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 CYTH4Q9UIA0 394 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 A0A087WZ62 844 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 ANP32DO95626 131 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 KRT16P08779 473 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 ZNF286BP0CG31 522 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 ASPAP45381 313 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 ZNF132P52740 706 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 NCALDP61601 193 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 PTK6Q13882 451 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 SPDYCQ5MJ68 293 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 MPZL3Q6UWV2 235 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 ERO1BQ86YB8 467 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 TMEM35BQ8NCS4 154 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 JOSD2Q8TAC2 188 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 RMDN2Q96LZ7 410 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 FDXACB1Q9BRP7 624 aaPredicted RBP13.85□□□□□ -0.19
CTNS-201ENST00000046640 TMEM121Q9BTD3 319 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 SYNCQ9H7C4 482 aa13.85□□□□□ -0.19
CTNS-201ENST00000046640 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.85□□□□□ -0.19
CTNS-201ENST00000046640 PSTPIP1O43586 416 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 TNNC2P02585 160 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 ITGB3P05106 788 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 NQO1P15559 274 aaKnown RBP13.84□□□□□ -0.19
CTNS-201ENST00000046640 GBP1P32455 592 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 MCL1Q07820 350 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 RHBDF2Q6PJF5 856 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 KATNAL2Q8IYT4 538 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 FAM167AQ96KS9 214 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 RUNDC3BQ96NL0 473 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 TWNKQ96RR1 684 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 XYLT2Q9H1B5 865 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 CDT1Q9H211 546 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 SMYD3Q9H7B4 428 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 CNTN6Q9UQ52 1028 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 AKT3Q9Y243 479 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 KIF1CO43896 1103 aaKnown RBP13.84□□□□□ -0.19
CTNS-201ENST00000046640 BANF1O75531 89 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 SUN1O94901 812 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 INSRRP14616 1297 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 TMED2Q15363 201 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 CCNG2Q16589 344 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 PTPN20Q4JDL3 420 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 EAPPQ56P03 285 aaPredicted RBP13.84□□□□□ -0.19
CTNS-201ENST00000046640 SYCP2LQ5T4T6 812 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 FITM2Q8N6M3 262 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 EXD1Q8NHP7 514 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 GRK7Q8WTQ7 553 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 P3H4Q92791 437 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 ANKRD36BP1Q96IX9 119 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 SLITRK1Q96PX8 696 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 TRAIPQ9BWF2 469 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 NINJ2Q9NZG7 142 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 EVPLQ92817 2033 aa13.84□□□□□ -0.19
CTNS-201ENST00000046640 LACTBL1A8MY62 500 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 ACKR2O00590 384 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 CLGNO14967 610 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 DIAPH2O60879 1101 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 TTC4O95801 387 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 TMEM62Q0P6H9 643 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 CDCA2Q69YH5 1023 aaPredicted RBP13.83□□□□□ -0.2
CTNS-201ENST00000046640 RPAINQ86UA6 219 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 ANKRD13AQ8IZ07 590 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 UBA3Q8TBC4 463 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 CDCA5Q96FF9 252 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 SDCBP2Q9H190 292 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 RPF1Q9H9Y2 349 aaKnown RBP13.83□□□□□ -0.2
CTNS-201ENST00000046640 POC1B-GALNT4F8VUJ3 575 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 PAX7P23759 505 aa13.83□□□□□ -0.2
CTNS-201ENST00000046640 PSMA2P25787 234 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms