RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 KIFC3Q9BVG8 833 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 CCDC90BQ9GZT6 254 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 DMAP1Q9NPF5 467 aaPredicted RBP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 SSX2IPQ9Y2D8 614 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 ROBO3Q96MS0 1386 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 COPEO14579 308 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 NR3C2P08235 984 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 KRT7P08729 469 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 YY1P25490 414 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 GCLCP48506 637 aaPredicted RBP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 DCTN2Q13561 401 aaKnown RBP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 GABPB2Q8TAK5 448 aaPredicted RBP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 DDX50Q9BQ39 737 aaKnown RBP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 MMTAG2Q9BU76 263 aaKnown RBP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 FAM129AQ9BZQ8 928 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 PAIP1Q9H074 479 aaKnown RBP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 TMEM8AQ9HCN3 771 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 JPH1Q9HDC5 661 aaPredicted RBP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 GPRC5CQ9NQ84 441 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 ITGB1BP2Q9UKP3 347 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 APOBEC2Q9Y235 224 aaKnown RBP12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 PPP2R3BQ9Y5P8 575 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 ARFGEF1Q9Y6D6 1849 aa12.7□□□□□ -0.38
TSPAN9-201ENST00000011898 GTPBP10A4D1E9 387 aaKnown RBP12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 FAM86B1E9PN63 330 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 CRCPO75575 148 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 FAM86B2P0C5J1 330 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 TAL1P17542 331 aaPredicted RBP12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 ARL4AP40617 200 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 INPP1P49441 399 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 ZNF568Q3ZCX4 644 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 PCGF5Q86SE9 256 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 CBWD2Q8IUF1 395 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 DNAAF3Q8N9W5 541 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 TMEM143Q96AN5 459 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 RPAP3Q9H6T3 665 aaPredicted RBP12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 CAAP1Q9H8G2 361 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 KRT82Q9NSB4 513 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 HOXC10Q9NYD6 342 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 CLIC5Q9NZA1 410 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 FER1L6Q2WGJ9 1857 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 H3BRJ5 948 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 SGPL1O95470 568 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 KCNMA1Q12791 1236 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 COG2Q14746 738 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 DUOXA2Q1HG44 320 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 RNF220Q5VTB9 566 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 JADE1Q6IE81 842 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 KCNV1Q6PIU1 500 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 ISLR2Q6UXK2 745 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 PATL1Q86TB9 770 aaKnown RBP12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 PPM1NQ8N819 430 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 STK32AQ8WU08 396 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 HAS1Q92839 578 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 ARHGAP26Q9UNA1 814 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 DDX3XO00571 662 aaKnown RBP eCLIP12.69□□□□□ -0.383e-7■■■■□ 22.5
TSPAN9-201ENST00000011898 SERPINB1P30740 379 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 ARHGEF6Q15052 776 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 C2CD6Q53TS8 623 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 SYDE1Q6ZW31 735 aaPredicted RBP12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 FLCNQ8NFG4 579 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 CCT6BQ92526 530 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 DNAJC19Q96DA6 116 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 ROPN1BQ9BZX4 212 aaPredicted RBP12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 TRABDQ9H4I3 376 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 ROPN1Q9HAT0 212 aaPredicted RBP12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 MAGED2Q9UNF1 606 aaPredicted RBP12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 PCDHGC5Q9Y5F6 944 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 A0A0A6YYK5 440 aaPredicted RBP12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 EME2A4GXA9 379 aaPredicted RBP12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 DPPA5A6NC42 116 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 DEAF1O75398 565 aaPredicted RBP12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 DDHD2O94830 711 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 ITGA8P53708 1063 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 KCNA1Q09470 495 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 CBX3Q13185 183 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 KLHL38Q2WGJ6 581 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 TTMPQ5BVD1 217 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 ATG16L1Q676U5 607 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 ATP11CQ8NB49 1132 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 SCG3Q8WXD2 468 aaKnown RBP12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 BAP1Q92560 729 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 ABHD8Q96I13 439 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 SCYL1Q96KG9 808 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 TMEM39BQ9GZU3 492 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 FAM192AQ9GZU8 254 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 ABCF3Q9NUQ8 709 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 WDR70Q9NW82 654 aa12.69□□□□□ -0.38
TSPAN9-201ENST00000011898 CSPG5O95196 566 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 EPHX2P34913 555 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 GARSP41250 739 aaKnown RBP12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 MTM1Q13496 603 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 HIF1AQ16665 826 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 ANKMY2Q8IV38 441 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 C4orf33Q8N1A6 199 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 SNX25Q9H3E2 840 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 SLC38A10Q9HBR0 1119 aa12.68□□□□□ -0.38
TSPAN9-201ENST00000011898 ZNF180Q9UJW8 692 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms