RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Myo18aQ9JMH9 2050 aaKnown RBP9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Vmn2r7E9PYL5 915 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gm7275E9Q1B3 247 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 G430095P16RikE9Q913 147 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Farp1F8VPU2 1048 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Vmn2r3H3BJ88 915 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Vmn2r6H3BK29 913 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 TecP24604 630 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gjb6P70689 261 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 TraddQ3U0V2 310 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pick1Q62083 416 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ppp2r1bQ7TNP2 601 aaKnown RBP9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dyrk4Q8BI55 632 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dennd2aQ8C4S8 1000 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Calhm6Q8C9E8 313 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tspyl4Q8VD63 406 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Fthl17aQ9DAX0 182 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Slc12a4Q9JIS8 1085 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Khdrbs2Q9WU01 349 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Mtmr2Q9Z2D1 643 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Syde2E9PUP1 1314 aa9.69□□□□□ -0.86
Col6a5-201ENSMUST00000165165 DgkaO88673 730 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Trim43bP86448 445 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Kcnb1Q03717 857 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ttbk2Q3UVR3 1243 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rfx4Q7TNK1 735 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 PodnQ7TQ62 611 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Sema3dQ8BH34 777 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 A430089I19RikQ8C9W1 407 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Actl9Q8CG27 415 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 BfarQ8R079 450 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 4930503E14RikQ9D583 177 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Adgrb2Q8CGM1 1561 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rgs12Q8CGE9 1381 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rnf123Q5XPI3 1314 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Vmn2r121A2BE32 847 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Srp54P14576 504 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Aco1P28271 889 aaKnown RBP9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tlr8P58682 1032 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Hnrnph2P70333 449 aaKnown RBP9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Mark2Q05512 776 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 LbrQ3U9G9 626 aaKnown RBP9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Fam91a1Q3UVG3 837 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ifi44Q8BV66 422 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tspan14Q8QZY6 270 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Mrpl1Q99N96 336 aaKnown RBP9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 NwcQ9CQI4 244 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 H2bfmQ9DAB5 224 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Hnrnph1O35737 449 aaKnown RBP9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 MyocO70624 490 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gp1bbP56400 206 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Taf13P61216 124 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Stx5Q8K1E0 355 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Upb1Q8VC97 393 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Zcrb1Q9CZ96 217 aaKnown RBP9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tle6Q9WVB3 581 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Stk39Q9Z1W9 556 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ncoa3O09000 1398 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Olfr726E9Q8X3 321 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Anxa8O35640 327 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ets2P15037 468 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Olfr725Q05A45 321 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Fam92bQ3V2J0 292 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pydc3Q3V3Q4 588 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Usp28Q5I043 1051 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dync1li2Q6PDL0 492 aaKnown RBP9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Arid5bQ8BM75 1188 aaKnown RBP9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cops7bQ8BV13 264 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Gpr108Q91WD0 569 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tmed11Q9D2R4 215 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Hes6Q9JHE6 224 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ankfn1A0A140LIW7 1083 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Odr4Q4PJX1 447 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 A1cfQ5YD48 595 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Slc9c1Q6UJY2 1175 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Slf1Q8R3P9 1054 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Pcdha5Q91Y15 934 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Thg1lQ9CY52 298 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 RhouQ9EQT3 261 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tssc4Q9JHE7 317 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Plcg1Q62077 1302 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Dgcr6O35347 198 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Cdh15P33146 784 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Prox1P48437 737 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 DbtP53395 482 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Frmd8Q3UFK8 466 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Rbm20Q3UQS8 1199 aaKnown RBP9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Znf827Q505G8 1078 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Tlr11Q6R5P0 926 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Zfp61Q923D1 555 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Golph3Q9CRA5 298 aa9.68□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ttll9A2APC3 461 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Esp31A8R0W3 114 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Slc7a1Q09143 622 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Znf800Q0VEE6 662 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Naif1Q6PFD7 327 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Ube2q1Q7TSS2 422 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Mettl21eQ8CDZ2 244 aa9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Mmgt1Q8K273 131 aaKnown RBP9.67□□□□□ -0.86
Col6a5-201ENSMUST00000165165 Chn1Q91V57 459 aa9.67□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 65.3 ms